LOC110503296 (LOC106592207)


Basic Information

Item Value
gene id LOC110503296
gene name LOC106592207
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 63608671 ~ 63655491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958410.1
CAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCTCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCAAAGAGTGGGCACTGCCCATGGAACTGGCCGAACAGAACGCTCTCAGAAGTGGCGGTAAAACCGTCGCGAGGCCGGACCAGAGTAGCGGTGCTAGCTGGCTACTGAACCACCTCACACTGCGACTTTAGTCATTCAACAATTAACCGAGATTATATACCGGTGTTTAACTGGAAAGGCGAGAGCTACACCAAGGATACATCTCACTTAAGGAAAATGGAAACAGTTGCGGGTCAGAAAGAGAAGGCGAAGTTTGCCCCGCTGGTGCCCCGTGAGAAGAAGCCAGGGcatggagagaaaggagggggaaaAGGGAGTGAGAATaagtggaaaggagaggggggtggAAATAAGGAGAGAAACATTGATGTAGGAAAGAAGACAGGAGAATcatgtgaaggagagagaggagtagagagcaAGGGTAAGGCCTCTGGGTtagagaagaaaagaggagaaCGGATGAAGAAAGAAGGGAAGAAGAAGACGCCAGATACAGAAAAAGTGAGGGCTGCAGATGAAGGGGTTCCCCAGCAACAGgaaggtaaaggagagagaggaggaggagagggagtgaaggagaataaaaaacagaaaaataagGAAGACCTATCCAGGAAGGAAACAGATaaagggaaggagggaatgaatgggaaaaagaagaagaaagagaatgAGAAGGTCAGGAAGGAAGGGAAAGAGACAAAAAAGAAGAGACCGAGGGATGAGACAGAGAGCAATAAGgtgctcCATCTAACAGACAGTCAGTATGATGATATATTTGATAGTGCTACGGCTCTGGAGACACCTGTAGACAACTGTCTGGaggatgCCAGAGCTGTGCTGAGTGAGGTGGAGTTACTGCAGGCCACCATTGACCAGGTCTCTCTCAGGGAGGAGGAACAGCCTCCCAGGAGAGTGTCTGGTGAGAGAAAGACTGCAGCTTCcggctcacacacacagaggaagaggaagagaagaagggaggaagaggaagacagcgACTCCAGTGCAGAATTTGATCAGTGGGTTCAGTGTAGTAGGTCTGTCTGTGGGAAATGGAGAAGAGTAGAGAGACACGTTGACCTGGCTGCCCTTCCCAGCGACTGGACCTGTATACAcgacacaggCCCTGGTCTCTGTGAGGCTACGGAGGACAGCTGGTCGGGACAAGAGTGTGATGTCATCAACAGCAGTCTGGTTCCTGGATCTCTGGTCTGGGCTCAACAGATTGGATATCCTTGGTGGCCAGCGATAGTGGAGAGAGATCCAGACACCAAGACCTTCTGCCAGTTCAACAGGAATACTGACCTGTACCCTTGCAGGTACCATGTAACATACCTGGGGGAACCAGTCAGCAGAGCCTGGGTGTGTCGGTCTAAAGTCAGAACTTACACAGAACTCACTGAGGATGCCGCCATCACGgggaagtctctccagagattcaAGAAGAAGTTGAGAGAAGCTGTCCTCATAGCAACACAAGCCCAGAGTATTCCACTCAAGaggaggtTGTCTAGGTTTGGGTTCTGGACTCAACAAACATCAGACAGAGAGAGCTCAGAGGACAGCGACATTGCTGAGGTGATGGAGATGCTTCTGGACCATGAAAAGAGCAGGAGGTCAGCATACGTCAGAAACAAGAAGTCAGCTGTGGTGAATGCTGCtaagagacagagtgaaagagagcagAGTGAGCCCAGAAAGAAAACCATGAaacaaggaggagagagagaatggaggagagaagacgagactgaagggaggagggaaggagagcagCTTGGAATAAAAAGACCAgAGCCAATTGGAGGGGACCTGAACGAGGGAGgaaagggagtgaaagagagagctggagagaagaaaaaaggagaggaggaaggtaagAAGAGAGTGATGACTCCCTGGCTCTCCAAACTAAAGAAAGGCAGCGCGACCACGGCCAGACCAGCCTCTCCACCCAGCAAAGACCAGACTgtactagggagagagagagaggagaagagagaaggagtggaggagaagagagagggagacggagtagAGGAGGAAAGAGCGAAAGAGACCAGTAAAGGAGAAGAAAGGAAggaactgagagaggagagaagcctggaagaggaagagaaggaggatgaagagggacaTGAGTCTGATATATCTGTTGAGGGGGAGGCAGtgaaggagaaggaagagggacATGAGTCTGATATATCTGTTGAGGGGGAggcagtgaaggaggaggaagagggacatGAGTCTGATATATCTGTTGAGGAGGAGGCAgtgaaagaggaagggagagaaacaggagagggaggagaggaacaacaGATCAAGGAAAAGGAAGGGAAGGAGTTTGTACAATCTGTGTTTGTAggggagggggatgagggaggagaggatgattTCCTAGATGAAGACATGGAGATTCTGGGCTGCAGAGAGGAAGTGATGAAGAGACTAGCTCAGGAACCCAttcaggaagaggaggatgacttCTCTATCATGCTGtttgaggaggagtagagagagggagggaagaggggagtagGTAACAGTCTATCTCCTACTGTTCGGGTCAGGAACCGTTTCTGTTTTCTATTGTTGATGTAAATAGTTGAGTTCGGGTATGTAAGTTATGAGTTGGGTTACATTATTTAATCAGttgtataatataataaacattgAATTATTAGTTTCTAACTTGTGAGTTTGTCTGGTTGTAAATGGTGGAGATGGGAGCAGCATtgaaccagtgtgtgtgtagggggtttgtgtgtaaaaaaaacaacgttGTTTTGGAGTTTCAGAGTTGTTTGTTTCCTGCTAGCTGCTGTTTTTACagggtactctctct
>XM_036958411.1
CAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCTCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCACAGAGTGGGCACTGCCCATAGCAACGTCCAAAGAGTGGGCACTGCCCATGGAACTGGCCGAACAGAACGCTCTCAGAAGTGGCGGTAAAACCGTCGCGAGGCCGGACCAGAGTAGCGGTGCTAGCTGGCTACTGAACCACCTCACACTGCGACTTTAGTCATTCAACAATTAACCGAGATTATATACCGGTGTTTAACTGGAAAGGCGAGAGCTACACCAAGGATACATCTCACTTAAGGAAAATGGAAACAGTTGCGGGTCAGAAAGAGAAGGCGAAGTTTGCCCCGCTGGTGCCCCGTGAGAAGAAGCCAGGGcatggagagaaaggagggggaaaAGGGAGTGAGAATaagtggaaaggagaggggggtggAAATAAGGAGAGAAACATTGATGTAGGAAAGAAGACAGGAGAATcatgtgaaggagagagaggagtagagagcaAGGGTAAGGCCTCTGGGTtagagaagaaaagaggagaaCGGATGAAGAAAGAAGGGAAGAAGAAGACGCCAGATACAGAAAAAGTGAGGGCTGCAGATGAAGGGGTTCCCCAGCAACAGgaaggtaaaggagagagaggaggaggagagggagtgaaggagaataaaaaacagaaaaataagGAAGACCTATCCAGGAAGGAAACAGATaaagggaaggagggaatgaatgggaaaaagaagaagaaagagaatgAGAAGGTCAGGAAGGAAGGGAAAGAGACAAAAAAGAAGAGACCGAGGGATGAGACAGAGAGCAATAAGgtgctcCATCTAACAGACAGTCAGTATGATGATATATTTGATAGTGCTACGGCTCTGGAGACACCTGTAGACAACTGTCTGGaggatgCCAGAGCTGTGCTGAGTGAGGTGGAGTTACTGCAGGCCACCATTGACCAGGTCTCTCTCAGGGAGGAGGAACAGCCTCCCAGGAGAGTGTCTGGTGAGAGAAAGACTGCAGCTTCcggctcacacacacagaggaagaggaagagaagaagggaggaagaggaagacagcgACTCCAGTGCAGAATTTGATCAGTGGGTTCAGTGTAGTAGGTCTGTCTGTGGGAAATGGAGAAGAGTAGAGAGACACGTTGACCTGGCTGCCCTTCCCAGCGACTGGACCTGTATACAcgacacaggCCCTGGTCTCTGTGAGGCTACGGAGGACAGCTGGTCGGGACAAGAGTGTGATGTCATCAACAGCAGTCTGGTTCCTGGATCTCTGGTCTGGGCTCAACAGATTGGATATCCTTGGTGGCCAGCGATAGTGGAGAGAGATCCAGACACCAAGACCTTCTGCCAGTTCAACAGGAATACTGACCTGTACCCTTGCAGGTACCATGTAACATACCTGGGGGAACCAGTCAGCAGAGCCTGGGTGTGTCGGTCTAAAGTCAGAACTTACACAGAACTCACTGAGGATGCCGCCATCACGgggaagtctctccagagattcaAGAAGAAGTTGAGAGAAGCTGTCCTCATAGCAACACAAGCCCAGAGTATTCCACTCAAGaggaggtTGTCTAGGTTTGGGTTCTGGACTCAACAAACATCAGACAGAGAGAGCTCAGAGGACAGCGACATTGCTGAGGTGATGGAGATGCTTCTGGACCATGAAAAGAGCAGGAGGTCAGCATACGTCAGAAACAAGTCAGCTGTGGTGAATGCTGCtaagagacagagtgaaagagagcagAGTGAGCCCAGAAAGAAAACCATGAaacaaggaggagagagagaatggaggagagaagacgagactgaagggaggagggaaggagagcagCTTGGAATAAAAAGACCAgAGCCAATTGGAGGGGACCTGAACGAGGGAGgaaagggagtgaaagagagagctggagagaagaaaaaaggagaggaggaaggtaagAAGAGAGTGATGACTCCCTGGCTCTCCAAACTAAAGAAAGGCAGCGCGACCACGGCCAGACCAGCCTCTCCACCCAGCAAAGACCAGACTgtactagggagagagagagaggagaagagagaaggagtggaggagaagagagagggagacggagtagAGGAGGAAAGAGCGAAAGAGACCAGTAAAGGAGAAGAAAGGAAggaactgagagaggagagaagcctggaagaggaagagaaggaggatgaagagggacaTGAGTCTGATATATCTGTTGAGGGGGAGGCAGtgaaggagaaggaagagggacATGAGTCTGATATATCTGTTGAGGGGGAggcagtgaaggaggaggaagagggacatGAGTCTGATATATCTGTTGAGGAGGAGGCAgtgaaagaggaagggagagaaacaggagagggaggagaggaacaacaGATCAAGGAAAAGGAAGGGAAGGAGTTTGTACAATCTGTGTTTGTAggggagggggatgagggaggagaggatgattTCCTAGATGAAGACATGGAGATTCTGGGCTGCAGAGAGGAAGTGATGAAGAGACTAGCTCAGGAACCCAttcaggaagaggaggatgacttCTCTATCATGCTGtttgaggaggagtagagagagggagggaagaggggagtagGTAACAGTCTATCTCCTACTGTTCGGGTCAGGAACCGTTTCTGTTTTCTATTGTTGATGTAAATAGTTGAGTTCGGGTATGTAAGTTATGAGTTGGGTTACATTATTTAATCAGttgtataatataataaacattgAATTATTAGTTTCTAACTTGTGAGTTTGTCTGGTTGTAAATGGTGGAGATGGGAGCAGCATtgaaccagtgtgtgtgtagggggtttgtgtgtaaaaaaaacaacgttGTTTTGGAGTTTCAGAGTTGTTTGTTTCCTGCTAGCTGCTGTTTTTACagggtactctctctct

Function

NR:

description
zinc finger CW-type PWWP domain protein 1

GO: NA

KEGG:

id description
K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958410.1 False 3004 mRNA 0.49 16 63608671 63655489
XM_036958411.1 True 3003 mRNA 0.49 16 63608671 63655491

Neighbor

gene id symbol gene type direction distance location
LOC118942978 NA coding upstream 74109 63528908 ~ 63534562 (+)
si:ch73-265d7.2 NA coding upstream 236458 63363590 ~ 63372213 (+)
LOC110500814 LOC100194636 coding upstream 265057 63329511 ~ 63343614 (+)
pfn1 prof1 coding upstream 291150 63307806 ~ 63317521 (+)
LOC118942976 NA coding upstream 370364 63232777 ~ 63238307 (+)
zgc:158659 pik3ca coding downstream 8532 63664023 ~ 63813757 (+)
ctc1 LOC106595900 coding downstream 177064 63832555 ~ 63879982 (+)
tfr2 LOC106592655 coding downstream 237703 63893194 ~ 64066184 (+)
LOC110510008 LOC106562799 coding downstream 892451 64547942 ~ 64579984 (+)
LOC110509408 LOC106592366 coding downstream 1010072 64665563 ~ 64705116 (+)
G1760973 NA non-coding upstream 1031 63607282 ~ 63607640 (+)
G1760968 NA non-coding upstream 10938 63597124 ~ 63597733 (+)
G1760957 NA non-coding upstream 33344 63571331 ~ 63575327 (+)
G1760955 NA non-coding upstream 43826 63563526 ~ 63564845 (+)
G1760947 NA non-coding upstream 53019 63555116 ~ 63555652 (+)
G1760992 NA non-coding downstream 111 63655602 ~ 63656129 (+)
G1760998 NA non-coding downstream 14108 63669599 ~ 63669805 (+)
G1761000 NA non-coding downstream 20665 63676156 ~ 63676466 (+)
G1761027 NA non-coding downstream 156180 63811671 ~ 63813267 (+)
G1760929 NA non-coding downstream 160804 63816295 ~ 63817081 (+)
G1760941 NA other upstream 57179 63549905 ~ 63551492 (+)
G1760865 NA other upstream 190412 63396272 ~ 63418259 (+)
G1760800 NA other upstream 392918 63210133 ~ 63215753 (+)
LOC110500813 tsc22d4 other upstream 580231 62991115 ~ 63050683 (+)
G1761231 NA other downstream 761946 64417437 ~ 64418064 (+)
LOC110500801 LOC106608413 other downstream 1079217 64734656 ~ 64754522 (+)
LOC118942983 NA other downstream 1099138 64754608 ~ 64760958 (+)
LOC110517355 NA other downstream 1151155 64806646 ~ 64842255 (+)

Expression


Co-expression Network