G1761000


Basic Information

Item Value
gene id G1761000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 63676156 ~ 63676466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2017017
aacaaactaacaaaataacaaaacgaacgtggCGCTATATAaaccgagtgctgacaggcaactacacatagacaataacccacaaaaccaaaatggcaacctaaataggatccccaaacAGAGACatcaataaacagctgcctctgattgggaaccaattcaggccaccatagacctacatttacctagacataccaaaaccccatagatgtacaaaaatcctagacaagacaaaaaacacacatacccaccctcgtcacaccatGACCGAACCAAaattataaagaaaacaaagataactaaggtaaGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2017017 True 311 lncRNA 0.40 1 63676156 63676466

Neighbor

gene id symbol gene type direction distance location
LOC110503296 LOC106592207 coding upstream 20665 63608671 ~ 63655491 (+)
LOC118942978 NA coding upstream 141594 63528908 ~ 63534562 (+)
si:ch73-265d7.2 NA coding upstream 303943 63363590 ~ 63372213 (+)
LOC110500814 LOC100194636 coding upstream 332542 63329511 ~ 63343614 (+)
pfn1 prof1 coding upstream 358635 63307806 ~ 63317521 (+)
ctc1 LOC106595900 coding downstream 156089 63832555 ~ 63879982 (+)
tfr2 LOC106592655 coding downstream 216728 63893194 ~ 64066184 (+)
LOC110510008 LOC106562799 coding downstream 871476 64547942 ~ 64579984 (+)
LOC110509408 LOC106592366 coding downstream 989097 64665563 ~ 64705116 (+)
LOC118942982 NA coding downstream 1033899 64705596 ~ 64715802 (+)
G1760998 NA non-coding upstream 6351 63669599 ~ 63669805 (+)
G1760992 NA non-coding upstream 20027 63655602 ~ 63656129 (+)
G1760973 NA non-coding upstream 68516 63607282 ~ 63607640 (+)
G1760968 NA non-coding upstream 78423 63597124 ~ 63597733 (+)
G1760957 NA non-coding upstream 100829 63571331 ~ 63575327 (+)
G1761027 NA non-coding downstream 135205 63811671 ~ 63813267 (+)
G1760929 NA non-coding downstream 139829 63816295 ~ 63817081 (+)
G1760927 NA non-coding downstream 142006 63818472 ~ 63822491 (+)
G1760926 LOC106608403 non-coding downstream 146765 63823231 ~ 63832109 (+)
G1761037 NA non-coding downstream 202300 63878766 ~ 63879538 (+)
G1760941 NA other upstream 124664 63549905 ~ 63551492 (+)
G1760865 NA other upstream 257897 63396272 ~ 63418259 (+)
G1760800 NA other upstream 460403 63210133 ~ 63215753 (+)
LOC110500813 tsc22d4 other upstream 647716 62991115 ~ 63050683 (+)
G1761231 NA other downstream 740971 64417437 ~ 64418064 (+)
LOC110500801 LOC106608413 other downstream 1058242 64734656 ~ 64754522 (+)
LOC118942983 NA other downstream 1078163 64754608 ~ 64760958 (+)
LOC110517355 NA other downstream 1130180 64806646 ~ 64842255 (+)

Expression


Co-expression Network