G1761893


Basic Information

Item Value
gene id G1761893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64582922 ~ 64583489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2018323
caggcgggcaggtacagggtcagggtcagggtcaggggagggtacagggtcaggacaggggcaggcagagtgggcaggcagagtggtcaggcgggcaggtacagggtcagggcaggcaagggtcaaaaccaggagggagagaaaaagggaggctggaaaagacaggagctgacaggacaaaagctggtaggcttgacaaacaagacgaactggcaacagacaaacagaaagcaCAGGTGCTGTATAAGTGTATaggagatgggcgacacctggaggggggtggagacaatcacaaagacaggtgaacaGATGACGGCGTGACAGATTTATATAAATAATGCTTTGTTGCTGCATTTAACTGTTGAAAATGCAGTTCATCATGTGGGAGAAGTCAGAGCTCAGGAATGATAGACAAGTTTCCctctagtaattaccagttggaggggtGGATTTTCAAGTGGATTTTTCCTAGTTTTATGCTCACATTCAGATTGTTATTTAGTCGTATGCTCATGGTCACATATGTAATTGCAGTGTACAGTGAAGTACTTAAGATCTGAGCTCCAac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2018323 True 568 lncRNA 0.49 1 64582922 64583489

Neighbor

gene id symbol gene type direction distance location
LOC110510008 LOC106562799 coding upstream 2938 64547942 ~ 64579984 (+)
tfr2 LOC106592655 coding upstream 517138 63893194 ~ 64066184 (+)
ctc1 LOC106595900 coding upstream 702940 63832555 ~ 63879982 (+)
zgc:158659 pik3ca coding upstream 769165 63664023 ~ 63813757 (+)
LOC110503296 LOC106592207 coding upstream 927431 63608671 ~ 63655491 (+)
LOC110509408 LOC106592366 coding downstream 82074 64665563 ~ 64705116 (+)
LOC118942982 NA coding downstream 126876 64705596 ~ 64715802 (+)
LOC110500801 LOC106608413 coding downstream 151167 64734656 ~ 64754522 (+)
LOC118942983 NA coding downstream 171119 64754608 ~ 64760958 (+)
LOC110517355 NA coding downstream 223163 64806646 ~ 64842255 (+)
G1761852 NA non-coding upstream 2122 64580555 ~ 64580800 (+)
G1761891 NA non-coding upstream 9509 64572917 ~ 64573413 (+)
G1761886 NA non-coding upstream 23581 64558611 ~ 64559341 (+)
G1761866 NA non-coding upstream 59404 64521984 ~ 64523518 (+)
G1761894 NA non-coding downstream 234 64583723 ~ 64584054 (+)
G1761895 NA non-coding downstream 2343 64585832 ~ 64586607 (+)
G1761898 NA non-coding downstream 6036 64589525 ~ 64589864 (+)
G1761901 NA non-coding downstream 18498 64601987 ~ 64602516 (+)
G1761915 NA non-coding downstream 44567 64628056 ~ 64628603 (+)
G1761231 NA other upstream 164858 64417437 ~ 64418064 (+)
G1760941 NA other upstream 1031430 63549905 ~ 63551492 (+)
G1760865 NA other upstream 1164663 63396272 ~ 63418259 (+)
si:ch73-265d7.2 NA other upstream 1210751 63363590 ~ 63372213 (+)
G1762135 NA other downstream 283933 64867422 ~ 64867665 (+)
LOC110498323 LOC105006500 other downstream 299867 64855210 ~ 64914698 (+)

Expression


Co-expression Network