cfap91 (maats1)


Basic Information

Item Value
gene id cfap91
gene name maats1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25325231 ~ 25333857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958975.1
TTACAATCTCCATGGTTACGATGTGGCCCAGCTCTTGAAGTTTGACAGCtgcctacagtagctagctaccttgCATGATAGCTTTCTATCTATCCTCTTACTATTTATTTTTTAGATGAAGTGGTTTTAAACCGGTGCAAAAATGAGTATATCAGTAACTCGAACATTTCATAAGCAAAATGAAACCAACAAAGGTTTTACACAACAGCGGGTACACGACTATCTATATGACCCCGTATATACTGTGTCCGGGGAAATGGACCATGCAAGGGCCAGCTTCAAGGCACATGCATCAGTGGACCGGGTGAGGAAGGTTCCAGAGTATGGGTCCATGTTCAGTCACCTACCTCACCACCCTCGTTACGTCTTGCGTCTGGACACCACTGACCCTGTGCCCGCTTTTATTGACCGCCGCTGGCGAGGGTACACAGAGCAGCGCAGAGAGGCAGTTCAGCAGCtggcaagGGTCGTTCCTGGTCCTCTGTTTCAGGTCAGAGGCTGCAAAGACAGCAGTGTTTCAGGCATTGATCGTTGGAAGTTTTTCAAGTGCCCCCTGATCCCCTTTGCACAGCAGGTTCCCCCCGATGTGGTCTTTGCATTGCCCAAAGCTAACCCATACTCTACAGTGGAGGGGGGTAGTGAGCAGCTGCCCACTCCATTCCAGCGCACCATGGGAGTGCAGACTGACTACAGGGACAGTGAGGCCCAGACGGACCCCTACACCCCCGAATACGTGGTACGGCCCGGGACGGCCCGCCCAGAGCTGTTGACACTGGCCACACTGACATGGGgTCGTGGTCTTCCGGCGGGTCTGGCGGAGGTGGAAATGATTGAGCGAACCAGGGTGAAGCGGGCGTGGGAGGCCACCCTGCCCCCCATGGACGACCTGAGTCAACTagacaagaggaagaggatgatggatgagatggagaggaaggagtgggCCTTCAGGGAGGACGAGATCCAGAAGCTGCAGGAGGCTCGCCTGGCCTTGCTGATGGGTCTActgaggcagagggaggaggttCAGCAAGAGGCCACGGTGGACAGGCTGGACCTCAAGTACTCCCAGCACCAGAGAGACGAGAAGAGCAAGCTGAGCAAGatacgcaatgactacatcatctcaatgAGGAAGCTGACAGCGAAAAGAAAAAATGTGGAGGGAAAGCTAAAACGCCGTGACATCATCAAGGACTACTCCAACTACTCATCTCAGACGTACGCCCCTCTGTCCCGCATCGGCCTGTTCCCTGACCGCCACTCCCAACGCAACATGGTCAAGAGCCGCTACCTTGATACCTATGAAGGTCTGCTGGAGCTGGAGGCGGGACTTCCGGTCTCAGTGACAGAGCCATGTATCAAAGCCCCCGTACCCAAAGTCAGCAAGGGCTTCGTTAAACGCTCTGCACGCAGAGAGATGGAGCTCATGAAGAcacaccagGCTCTGAAGGAGGAGAAGACTCGTGTGGAGCAGAAGAAGACCCTGCGCTTCCTCTTTAAGACAGAGAAATCTGTTCCTCGACCACAGACCCCCGTGGTGGACGAGCCCCCTGAGggggacgaggagagagagttGGCTGTCATCTACTTGCAgaagctgctgaggggaagaAGCATTCAGAACCAGatgtTTGAGGGGAAGGAGAAGCGTCTAGAGCTGATCCAGGAGCTGAGAACCACTCATGCcctgcagagagaggagcaggagctGCAGAGAGCAGACACACAGCTCACGCTGGctctgcagagacagagagagcaacacacacacaagGCATCCTTGGTGGAGGGGTACCAGGCAGCTGTGGCAGGGGCGGAGCTTGTAGACATGCTCGACTTCCTATCGAAGGAGCTGATTCGCCTACAGGAGGAACGCAGGATCCATGCCTTCACCTTATTGGCCGAGAGAGACAGGCGCCTCCGAGAGGCCGAGGAGAGTGGGCGGAGACAGATGGAAGAGAGGAGAcgtagagaggaggatgagatctTCAaacaggtgATGAGGGTTCAtcaggagacagtagatctgtaccTGGAGGACATCATCCTGGGGACTCTGGACCAGACAGCAGACCAACAGGCCAGACAGGAGATACGCAGAGTGGCAGAGGAGGTCAACAACATCGCATACGCCATGGAGGAGactcggaGCAGCCTGCAGTCAGAGGAGATCGTAGCAGAGCTGGTGTACAGCTTCCTGATCCCTGAGGTACAGAAGATCAACGTCAGAGACAGAGTGCGTCAGAGCCAGCGCAGGCACCTCCAGGCGGCTCACCAGATCATCCACGGGGGTGAAGAGAGCTCAGTGGCCCCTCCTCCTGGCTCCCCTGGGGCCCAGCGCCCCCCCTCGCCCTCGGACAGGGCCTCCAGCCAGCTCCTGGAGGAGATGCTAACCCATGTCGAACAGAAGCTGGAGGGAgcaggcaggggagaggaggagcgcagggaggtgggagaggcagagcagaAAAGAACCAGCTGAGAATAGATTAATTTCTCAACAGTAGAGAAAACACTTAGTGTTTCTACAAGCAATGCATCTCCAAAGAGTTCAGTGTCATGCTTTTGCTCAAATAAAACTGAGATTTTATTGAATTATCA

Function

NR:

description
cilia- and flagella-associated protein 91

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958975.1 True 2604 mRNA 0.55 17 25325231 25333857

Neighbor

gene id symbol gene type direction distance location
LOC110501614 ox2g coding upstream 101755 25193435 ~ 25223476 (+)
LOC110501611 pdzd1 coding upstream 162392 25155097 ~ 25162839 (+)
LOC110501609 fam155a coding upstream 316838 24848514 ~ 25013655 (+)
LOC110501605 LOC106582130 coding upstream 902164 24394068 ~ 24423067 (+)
LOC110501999 LOC106586666 coding upstream 1000474 24264331 ~ 24324757 (+)
LOC118943581 NA coding downstream 67622 25401479 ~ 25407741 (+)
LOC110502118 LOC106582051 coding downstream 230811 25564668 ~ 25587687 (+)
LOC110501624 LOC106582115 coding downstream 285321 25619178 ~ 25651263 (+)
LOC110501626 LOC106582114 coding downstream 342180 25676037 ~ 25695731 (+)
LOC110501629 ppa6 coding downstream 369039 25702896 ~ 25708893 (+)
G1792652 LOC106582122 non-coding upstream 16176 25307960 ~ 25309055 (+)
G1792653 NA non-coding upstream 18319 25303526 ~ 25306912 (+)
G1792294 NA non-coding upstream 133445 25191546 ~ 25191786 (+)
G1792290 NA non-coding upstream 138023 25187004 ~ 25187208 (+)
G1792289 NA non-coding upstream 139370 25185578 ~ 25185861 (+)
G1792647 NA non-coding downstream 10822 25344679 ~ 25361506 (+)
G1792712 NA non-coding downstream 64805 25398662 ~ 25446620 (+)
G1792728 NA non-coding downstream 90977 25424834 ~ 25434727 (+)
G1792726 NA non-coding downstream 91423 25425280 ~ 25427178 (+)
G1792941 NA non-coding downstream 212014 25545871 ~ 25546074 (+)
G1792649 NA other upstream 28674 25294546 ~ 25296557 (+)
G1792040 NA other upstream 481946 24842942 ~ 24843285 (+)
G1790805 NA other upstream 1205756 24118562 ~ 24119475 (+)
G1793045 NA other downstream 397469 25731326 ~ 25731754 (+)
G1793717 NA other downstream 981969 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2569725 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2703071 28036917 ~ 28052019 (+)
G1795550 NA other downstream 2757708 28091565 ~ 28092116 (+)

Expression


Co-expression Network