trnaa-ugc-174


Basic Information

Item Value
gene id trnaa-ugc-174
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28290225 ~ 28290297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-174
gcccgtgtggctcaggtggtagagcgtggtgcttgcaacgccagggctgtgggtttgattcccactgggGACC

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-174 True 73 mRNA 0.64 1 28290225 28290297

Neighbor

gene id symbol gene type direction distance location
LOC110501694 LOC106582055 coding upstream 213654 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 238206 28036917 ~ 28052019 (+)
ccdc93 ccdc93 coding upstream 253461 28028462 ~ 28036764 (+)
LOC110501690 LOC106582058 coding upstream 354909 27930952 ~ 27935316 (+)
LOC110501688 LOC106582045 coding upstream 407325 27880850 ~ 27882900 (+)
LOC110501697 LOC106582162 coding downstream 411570 28701867 ~ 28702664 (+)
epha6 LOC106582188 coding downstream 465493 28755790 ~ 28976739 (+)
LOC110502085 LOC106582160 coding downstream 689921 28977890 ~ 28984226 (+)
LOC110502121 cld14 coding downstream 703036 28993333 ~ 28994549 (+)
LOC110501700 LOC106582186 coding downstream 707466 28997763 ~ 29010281 (+)
G1796021 NA non-coding upstream 22110 28267880 ~ 28268115 (+)
G1796012 NA non-coding upstream 43393 28243618 ~ 28246832 (+)
G1796011 NA non-coding upstream 47965 28242039 ~ 28242260 (+)
G1795998 NA non-coding upstream 61821 28228155 ~ 28228404 (+)
G1795981 NA non-coding upstream 84241 28205744 ~ 28205984 (+)
G1796034 NA non-coding downstream 1032 28291329 ~ 28320522 (+)
G1796054 NA non-coding downstream 43922 28334219 ~ 28334515 (+)
G1796065 NA non-coding downstream 72391 28362688 ~ 28364521 (+)
LOC110502084 NA non-coding downstream 105677 28236220 ~ 28400108 (+)
G1796101 NA non-coding downstream 164675 28454972 ~ 28458461 (+)
G1795550 NA other upstream 198109 28091565 ~ 28092116 (+)
G1795411 NA other upstream 377350 27898367 ~ 27912875 (+)
G1793717 NA other upstream 1973982 26315826 ~ 26316243 (+)
G1793045 NA other upstream 2558471 25731326 ~ 25731754 (+)
G1797582 NA other downstream 1453895 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1633260 29917773 ~ 29933035 (+)
G1798168 NA other downstream 2210359 30500656 ~ 30545954 (+)

Expression


Co-expression Network