G1796021


Basic Information

Item Value
gene id G1796021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28267880 ~ 28268115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2055436
gtctaagatctagaaggattctgtatggaggaatggtctaagatctagaaggattctgtatggaggaatggtctaagatctagAGGgcttctgtatggaggaatggtctaagatctagAAGgcttctgtatggaggaatggtctaagatctagaaggattctgtatggaggaatggtctaagatctagAAGgcttctgtatggaggaatggtctaagatctagaaggattctgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2055436 True 236 lncRNA 0.41 1 28267880 28268115

Neighbor

gene id symbol gene type direction distance location
LOC110501694 LOC106582055 coding upstream 191309 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 215861 28036917 ~ 28052019 (+)
ccdc93 ccdc93 coding upstream 231116 28028462 ~ 28036764 (+)
LOC110501690 LOC106582058 coding upstream 332564 27930952 ~ 27935316 (+)
LOC110501688 LOC106582045 coding upstream 384980 27880850 ~ 27882900 (+)
trnaa-ugc-174 NA coding downstream 22110 28290225 ~ 28290297 (+)
LOC110501697 LOC106582162 coding downstream 433752 28701867 ~ 28702664 (+)
epha6 LOC106582188 coding downstream 487675 28755790 ~ 28976739 (+)
LOC110502085 LOC106582160 coding downstream 712103 28977890 ~ 28984226 (+)
LOC110502121 cld14 coding downstream 725218 28993333 ~ 28994549 (+)
G1796012 NA non-coding upstream 21048 28243618 ~ 28246832 (+)
G1796011 NA non-coding upstream 25620 28242039 ~ 28242260 (+)
G1795998 NA non-coding upstream 39476 28228155 ~ 28228404 (+)
G1795981 NA non-coding upstream 61896 28205744 ~ 28205984 (+)
G1795973 NA non-coding upstream 74830 28192818 ~ 28193050 (+)
G1796034 NA non-coding downstream 23214 28291329 ~ 28320522 (+)
G1796054 NA non-coding downstream 66104 28334219 ~ 28334515 (+)
G1796065 NA non-coding downstream 94573 28362688 ~ 28364521 (+)
LOC110502084 NA non-coding downstream 127859 28236220 ~ 28400108 (+)
G1796101 NA non-coding downstream 186857 28454972 ~ 28458461 (+)
G1795550 NA other upstream 175764 28091565 ~ 28092116 (+)
G1795411 NA other upstream 355005 27898367 ~ 27912875 (+)
G1793717 NA other upstream 1951637 26315826 ~ 26316243 (+)
G1793045 NA other upstream 2536126 25731326 ~ 25731754 (+)
LOC110501700 LOC106582186 other downstream 740509 28997763 ~ 29010281 (+)
G1797582 NA other downstream 1476077 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1655442 29917773 ~ 29933035 (+)
G1798168 NA other downstream 2232541 30500656 ~ 30545954 (+)

Expression


Co-expression Network