LOC110502158 (LOC100137092)


Basic Information

Item Value
gene id LOC110502158
gene name LOC100137092
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43059549 ~ 43067135 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502158
CATCAACTCGAATTAGTTTAATCTCTGTGTCTTATTGGAACTTATTGACCACATCATTGCTGGGAACTGgtgtacaaatacattttttaggGTGAAAGTAGAAGATTACAGCAGTGTGAAAGAGACAATGAGAGCTCTTGTGCTAGGGTTGGTCTGTTTTGTGGCATGGCCTGGTTCTACAGAGGCTCAGTTTCCTCGAGTGTGTAGCACGGTAGAAGGGATCGTCTCAAAGCAGTGCTGCCCTGCCCTCGGGTCTGATCCTGCTAACGTGTGTGGACTTTTATCTGGATGAGGACACCAAACCCTGGGGTGGACCAATTCCAATGAGAAACTGAGATGACCGTGAAAGGTGGCCAACTACATGTTTTAATCAAACTTGCAGGTGCTTCAGTAACTTTGGTGGCTTTGACTGTGGTCAGTGTACGTTTGGCTGGACAGGACCAAACTGTGACGTGCATAAATCCCCAGTGGTGAGGAAGAACATCCACTCTCTGACTCCAGCTGAGCTCCAGGAGTTCCTGGATGTGTTGGACCGGGCCAAGAACACCACCCACCCAGACTATGTCATTGCCACACAGCACAGGCTGGCCCTGTTGGGGCCCAATGGAACCCAGCCCCAGTTCTCCAACAACATGATTCTCCCATAAAGGACCTGTCTTCATAACTTGGCACAGATACCACATACTCAGTCTGGAGAGAAACCTGCAGTTAAGAAGACTGACTGGCAATGAGAACTTTGCTGTTCCATTCTGGAACTTCGCCACAGGGCAGACTGAGTGTGACGTCTGTACAGACTCTCTCCTGGGGGGGCACAACCCAGATGACTCCTCCCTCATCAGTAACCAGTCCAGGTTCTCCAATTGGGGGGTGGTGTGTGACAGCATGGATGAAAATAATCGCCTGGTCACTCTGTGTAATGGAACTAGTGAGGGACGTATAAGGAGAGGTCAAATAGGAGGACCAACATGCTGCACCAGCGAAGACAGCATGGCTTTGAACCCTTAA

Function

NR:

description
L-dopachrome tautomerase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502158 True 1005 mRNA 0.49 4 43059549 43067135

Neighbor

gene id symbol gene type direction distance location
LOC110501902 LOC106582441 coding downstream 3075 43050404 ~ 43056474 (-)
LOC110501899 LOC106582439 coding downstream 235937 42801020 ~ 42823612 (-)
LOC110501898 LOC106582438 coding downstream 262057 42770253 ~ 42797492 (-)
LOC110501897 LOC106582436 coding downstream 310972 42740619 ~ 42748577 (-)
LOC110502155 psd12 coding downstream 453781 42603998 ~ 42605768 (-)
LOC110501903 LOC106582442 coding upstream 32197 43099332 ~ 43101649 (-)
LOC110502159 NA coding upstream 86652 43153787 ~ 43159661 (-)
LOC118943590 NA coding upstream 426150 43493285 ~ 43498392 (-)
LOC110502160 LOC106576908 coding upstream 518824 43585959 ~ 43587743 (-)
LOC110502161 LOC106582431 coding upstream 544414 43611549 ~ 43612567 (-)
G1812805 NA non-coding downstream 19833 43036738 ~ 43039716 (-)
G1812803 NA non-coding downstream 24748 43034485 ~ 43034801 (-)
G1812802 NA non-coding downstream 26134 43032988 ~ 43033415 (-)
G1812786 NA non-coding downstream 40577 43018656 ~ 43018972 (-)
G1812783 NA non-coding downstream 47357 43011980 ~ 43012192 (-)
G1812843 NA non-coding upstream 1462 43068597 ~ 43068810 (-)
G1812869 NA non-coding upstream 23608 43090743 ~ 43091294 (-)
G1812886 NA non-coding upstream 31465 43098600 ~ 43098868 (-)
G1812894 NA non-coding upstream 40853 43107988 ~ 43108296 (-)
G1812901 NA non-coding upstream 44965 43112100 ~ 43112330 (-)
G1812404 NA other downstream 381789 42677257 ~ 42677760 (-)
G1812079 LOC106582433 other downstream 670276 42386822 ~ 42389273 (-)
G1811042 NA other downstream 1454318 41604974 ~ 41605231 (-)
LOC110501886 rhg15 other downstream 1593902 41447899 ~ 41523764 (-)
LOC110502171 LOC106582464 other upstream 1443272 44473683 ~ 44553607 (-)
G1814480 NA other upstream 1606312 44673447 ~ 44673888 (-)
G1815615 LOC106582489 other upstream 2771615 45838750 ~ 45840982 (-)
G1816841 NA other upstream 4158416 47225551 ~ 47226646 (-)
G1816929 NA other upstream 4333987 47400985 ~ 47402047 (-)

Expression


Co-expression Network