G1785952


Basic Information

Item Value
gene id G1785952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19665448 ~ 19665660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2044529
cttgaggctgtaatcactgccaaaggtgcttcaacaaagtactgagtaaaggcacCTAAAGCCTACATGAAATCCCATTCCAGAAAAATAAatggtgaaaaaaaaatattggaaccatttctgtgtttgtccgctaggtgttatgggtattgtGACGAGCTCACTGTGGCCCTCTATAAAAACGAAGTACTAGCTGATAAACACAATTAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2044529 True 213 lncRNA 0.40 1 19665448 19665660

Neighbor

gene id symbol gene type direction distance location
plcd4b plcd4 coding upstream 9690 19630160 ~ 19655758 (+)
LOC110501568 cnot9 coding upstream 37494 19603742 ~ 19627954 (+)
ybey ybey coding upstream 92502 19570580 ~ 19572946 (+)
LOC118943580 cssa21h2orf88 coding upstream 214326 19444418 ~ 19451122 (+)
pms1 pms1 coding upstream 250751 19350624 ~ 19414697 (+)
LOC110501572 LOC106581856 coding downstream 13643 19679303 ~ 19686002 (+)
LOC110501573 LOC106586130 coding downstream 23356 19689016 ~ 19726868 (+)
zgc:66484 LOC106581857 coding downstream 68627 19734287 ~ 19743949 (+)
LOC110502116 NA coding downstream 206487 19872147 ~ 19872697 (+)
adarb1b LOC106581860 coding downstream 332179 19997839 ~ 20175660 (+)
G1785951 NA non-coding upstream 230 19665000 ~ 19665218 (+)
G1785945 znf142 non-coding upstream 2426 19662205 ~ 19663022 (+)
G1785578 NA non-coding upstream 91683 19538704 ~ 19573765 (+)
G1785544 NA non-coding upstream 162921 19502324 ~ 19502527 (+)
G1785953 NA non-coding downstream 250 19665910 ~ 19666169 (+)
G1785961 NA non-coding downstream 7940 19673600 ~ 19673834 (+)
G1786002 NA non-coding downstream 99978 19765638 ~ 19765914 (+)
G1786006 NA non-coding downstream 102369 19768029 ~ 19768416 (+)
G1785947 znf142 other upstream 3522 19661109 ~ 19661926 (+)
LOC110501548 LOC106586143 other upstream 467734 19186076 ~ 19197714 (+)
G1784476 asic4 other upstream 898308 18766319 ~ 18767140 (+)
asb1 asb1 other downstream 615353 20269646 ~ 20281952 (+)
G1786330 NA other downstream 617521 20283181 ~ 20284571 (+)
G1787719 NA other downstream 1468605 21134265 ~ 21136477 (+)
G1788811 LOC106581691 other downstream 2329704 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 2332813 21998473 ~ 21999623 (+)

Expression


Co-expression Network