XLOC_037139 (mlphb)


Basic Information

Item Value
gene id XLOC_037139
gene name mlphb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 24008879 ~ 24023369 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073104
TGCAGGGCTCAGTTTTGGCAGCAACTAACTTACAAGATTAAATCAGATGTTTCAGAAAGACCTCTGAGGTGGGGTTTAAATACTTTGCTTGCCCTTCCCAACCACACGGTTAATTGGACATGTGATAAACACAGCAGCTTGGTTTGCTGCCTGAAATGGTCAGCTGAAATTCAACCGGACTACTACAAGCTGCAACATCAACTCCAGatgCTTTCTCACTCCACCGGATGAGATTCAAGATGATGCCCAGCAGCAGTTCAGGAAAGAATCTGGATCTCTCTCGGCTAACAGACGATGAAGCCAAGCACGTCTGGCAGGTGATCCAGAGAGATTTCCACCTGCGAAAGAAAGAGGAGGACAGACTAGGgGAACTCAAGACTAAAATTATGAAAGAGGACAACAAGAGAGAGCTGCTGGAATATCAGCCTAAACTCAGTGATTCACTCTGCATTCGCTGTCTCCAACCCTTCAAATTCTTGGTCAACAGCAAGCGCCAATGTTTGGACTGCAAACTGTTTGTCTGCAAGTCCTGCAGTCGTTTTAACAAGAAAGACAGCGGTTGGGTGTGTGATCCATGCCACATGGCCAGAATGCTTAAGATTGGCACTCTAGAATGGTTCCATGAGAATGTACGCTCTCGCTTCAAGCGCTTTGGGAGTGCAAAGGTGATGAATTCGCTTTTCAAGAGGGTGAACAGTGACCGTGCCTGCTCTCAAACTGACCTCAGAGAGCCTCGAGACGATGACACGCACAGCATGCCTGAAGTTCACACTGCTTCTGTCTATAGTCAGGAAGATGAGCAATCTGAGAGGACTGACCGACGCCACCTTAGCCTGATGAGAAAAGGCAGGCGGCTGCTTCCTGTTCATCCTCTAGATTTTAATCTTGGTGTTGAGAACTGTGCTTATTCTCGGCCTCCCTTACTTCGGCATTCAGGTAGCCAGGAGAAAATAACCCAGACTAAGGACTCACTAGCAGAAGATGACTGGTCAACAACTGTTAAGCAGATACTAGAGAATGGAACTCATGGCAGAGGCAATGAGATTAAGGATATAATGCATATCAGCCAAAAGAGTCTGGACAAAGCCTCTCATTTTGATGACTGCACACCCCACCTAAACCAGAGGTTGGCAAAGTCATGTTCCCTCTCCAAAATGAGCCTCTCTTCAGCTGGCAGCACCAACTATCACCTCCAGCGCGAGCTTTCTTACAGCCTGGATGACTccgatgatgatgaggatgatgatgaagaagaatcAGAGATGAATGTTATATACAGTCATGCCCTACATAGGGAGCCCTCACCAGATGAGGTTCCTCCACAGATTATTGAGCTCAACAAGCGTATGTCAGCAATTGAATCTATTCTGAGCCGTTTGGAGCAGAAAATGACTTTGCCAATAATTGGGGGATCAGTTGAACAGGTTGAGCAGAAAGCTGAGGATTTGTCTCCAGCTGATTTAGAGGAGCTTGAGCTTAGGAAAAAGCTTGATGAACTCACTGAAAAAATAAGCGACAAAGGCTTTTCATCTGATGAGGAAGATGCAATTAAATCACCAATGGCCTCTCCAAAGAAAAGTGCAGTTTACCAAGTTTCACCTATAAGAGGAGCTTCAGCTGGACTTGTCCGACCTGACTGGCCTCTTGAGGCTGAATGGAAAGCAAAGCCGAATGCACACAAATCATTAAAAAAGCAGAAGAGGGTGAGTTCCTTTGAGTTTAGTAACACAACTAGCTGTGAGCTGTCACAGCTGGAGGGTAAAGTTGCAATGGCAGCAGCCAGCGTCCAGAGCACTCAAAGTGGGGTACGTCACTTTAGTCCATATTCTTTCTTTTAA
>TCONS_00073105
TGCAGGGCTCAGTTTTGGCAGCAACTAACTTACAAGATTAAATCAGATGTTTCAGAAAGACCTCTGAGGTGGGGTTTAAATACTTTGCTTGCCCTTCCCAACCACACGGTTAATTGGACATGTGATAAACACAGCAGCTTGGTTTGCTGCCTGAAATGGTCAGCTGAAATTCAACCGGACTACTACAAGCTGCAACATCAACTCCAGatgCTTTCTCACTCCACCGGATGAGATTCAAGATGATGCCCAGCAGCAGTTCAGGAAAGAATCTGGATCTCTCTCGGCTAACAGACGATGAAGCCAAGCACGTCTGGCAGGTGATCCAGAGAGATTTCCACCTGCGAAAGAAAGAGGAGGACAGACTAGGgGAACTCAAGACTAAAATTATGAAAGAGGACAACAAGAGAGAGCTGCTGGAATATCAGCCTAAACTCAGTGATTCACTCTGCATTCGCTGTCTCCAACCCTTCAAATTCTTGGTCAACAGCAAGCGCCAATGTTTGGACTGCAAACTGTTTGTCTGCAAGTCCTGCAGTCGTTTTAACAAGAAAGACAGCGGTTGGGTGTGTGATCCATGCCACATGGCCAGAATGCTTAAGATTGGCACTCTAGAATGGTTCCATGAGAATGTACGCTCTCGCTTCAAGCGCTTTGGGAGTGCAAAGGTGATGAATTCGCTTTTCAAGAGGGTGAACAGTGACCGTGCCTGCTCTCAAACTGACCTCAGAGAGCCTCGAGACGATGACACGCACAGCATGCCTGAAGTTCACACTGCTTCTGTCTATAGTCAGGAAGATGAGCAATCTGAGAGGACTGACCGACGCCACCTTAGCCTGCATTCAGGTAGCCAGGAGAAAATAACCCAGACTAAGGACTCACTAGCAGAAGATGACTGGTCAACAACTGTTAAGCAGATACTAGAGAATGGAACTCATGGCAGAGGCAATGAGATTAAGGATATAATGCATATCAGCCAAAAGAGTCTGGACAAAGCCTCTCATTTTGATGACTGCACACCCCACCTAAACCAGAGGTTGGCAAAGTCATGTTCCCTCTCCAAAATGAGCCTCTCTTCAGCTGGCAGCACCAACTATCACCTCCAGCGCGAGCTTTCTTACAGCCTGGATGACTccgatgatgatgaggatgatgatgaagaagaatcAGAGATGAATGTTATATACAGTCATGCCCTACATAGGGAGCCCTCACCAGATGAGGTTCCTCCACAGATTATTGAGCTCAACAAGCGTATGTCAGCAATTGAATCTATTCTGAGCCGTTTGGAGCAGAAAATGACTTTGCCAATAATTGGGGGATCAGTTGAACAGGTTGAGCAGAAAGCTGAGGATTTGTCTCCAGCTGATTTAGAGGAGCTTGAGCTTAGGAAAAAGCTTGATGAACTCACTGAAAAAATAAGCGACAAAGGCTTTTCATCTGATGAGGAAGATGCAATTAAATCACCAATGGCCTCTCCAAAGAAAAGTGCAGTTTACCAAGTTTCACCTATAAGAGGAGCTTCAGCTGGACTTGTCCGACCTGACTGGCCTCTTGAGGCTGAATGGAAAGCAAAGCCGAATGCACACAAATCATTAAAAAAGCAGAAGAGGGTGAGTTCCTTTGAGTTTAGTAACACAACTAGCTGTGAGCTGTCACAGCTGGAGGGTAAAGTTGCAATGGCAGCAGCCAGCGTCCAGAGCACTCAAAGTGGGGTTACAGACATTCAGAAACGAATCGCTGCTTTGAGTGCAGCAGGGATGACAGTGGAGACATCCCGCAGACGGGAGGCAGCAATGAAGCAAGATCATTACGGAAGTTGGTCACTATGTGAAACAATGACAGAACAATTTCAAAACAATGACAGATTCACATAA
>TCONS_00073106
CAGCTTGGTTTGCTGCCTGAAATGGTCAGCTGAAATTCAACCGGACTACTACAAGCTGCAACATCAACTCCAGatgCTTTCTCACTCCACCGGATGAGATTCAAGATGATGCCCAGCAGCAGTTCAGGAAAGAATCTGGATCTCTCTCGGCTAACAGACGATGAAGCCAAGCACGTCTGGCAGGTGATCCAGAGAGATTTCCACCTGCGAAAGAAAGAGGAGGACAGACTAGGgGAACTCAAGACTAAAATTATGAAAGAGGACAACAAGAGAGAGCTGCTGGAATATCAGCCTAAACTCAGTGATTCACTCTGCATTCGCTGTCTCCAACCCTTCAAATTCTTGGTCAACAGCAAGCGCCAATGTTTGGACTGCAAACTGTTTGTCTGCAAGTCCTGCAGTCGTTTTAACAAGAAAGACAGCGGTTGGGTGTGTGATCCATGCCACATGGCCAGAATGCTTAAGATTGGCACTCTAGAATGGTTCCATGAGAATGTACGCTCTCGCTTCAAGCGCTTTGGGAGTGCAAAGGTGATGAATTCGCTTTTCAAGAGGGTGAACAGTGACCGTGCCTGCTCTCAAACTGACCTCAGAGAGCCTCGAGACGATGACACGCACAGCATGCCTGAAGTTCACACTGCTTCTGTCTATAGTCAGGAAGATGAGCAATCTGAGAGGACTGACCGACGCCACCTTAGCCTGATGAGAAAAGGCAGGCGGCTGCTTCCTGTTCATCCTCTAGATTTTAATCTTGGTGTTGAGAACTGTGCTTATTCTCGGCCTCCCTTACTTCGGCATTCAGGTAGCCAGGAGAAAATAACCCAGACTAAGGACTCACTAGCAGAAGATGACTGGTCAACAACTGTTAAGCAGATACTAGAGAATGGAACTCATGGCAGAGGCAATGAGATTAAGGATATAATGCATATCAGCCAAAAGAGTCTGGACAAAGCCTCTCATTTTGATGACTGCACACCCCACCTAAACCAGAGGTTGGCAAAGTCATGTTCCCTCTCCAAAATGAGCCTCTCTTCAGCTGGCAGCACCAACTATCACCTCCAGCGCGAGCTTTCTTACAGCCTGGATGACTccgatgatgatgaggatgatgatgaagaagaatcAGAGATGAATGTTATATACAGTCATGCCCTACATAGGGAGCCCTCACCAGATGAGGTTCCTCCACAGATTATTGAGCTCAACAAGCGTATGTCAGCAATTGAATCTATTCTGAGCCGTTTGGAGCAGAAAATGACTTTGCCAATAATTGGGGGATCAGTTGAACAGGTTGAGCAGAAAGCTGAGGATTTGTCTCCAGCTGATTTAGAGGAGCTTGAGCTTAGGAAAAAGCTTGATGAACTCACTGAAAAAATAAGCGACAAAGGCTTTTCATCTGATGAGGAAGATGCAATTAAATCACCAATGGCCTCTCCAAAGAAAAGTGCAGTTTACCAAGTTTCACCTATAAGAGGAGCTTCAGCTGGACTTGTCCGACCTGACTGGCCTCTTGAGGCTGAATGGAAAGCAAAGCCGAATGCACACAAATCATTAAAAAAGCAGAAGAGGGTGAGTTCCTTTGAGTTTAGTAACACAACTAGCTGTGAGCTGTCACAGCTGGAGGGTAAAGTTGCAATGGCAGCAGCCAGCGTCCAGAGCACTCAAAGTGGGGTTACAGACATTCAGAAACGAATCGCTGCTTTGAGTGCAGCAGGGATGACAGTGGAGACATCCCGCAGACGGACTCCTCAGCCATCGAGGATGTTGCATGCATTTCCAATTAGAGGCAGCAATGAAGCAAGATCATTACGGAAGTTGGTCACTATGTGAAACAATGACAGAACAATTTCAAAACAATGACAGATTCACATAATGCATATTTAATGTTC
>TCONS_00073107
GCCTATAACTTAACTACAGGACACAGTTTATTCAAATATCACACAGAGACTCTCCTGACTCCCTGTAGGTTGAGCAGAAAGCTGAGGATTTGTCTCCAGCTGATTTAGAGGAGCTTGAGCTTAGGAAAAAGCTTGATGAACTCACTGAAAAAATAAGCGACAAAGGCTTTTCATCTGATGAGGAAGATGCAATTAAATCACCAATGGCCTCTCCAAAGAAAAGTGCAGTTTACCAAGTTTCACCTATAAGAGGAGCTTCAGCTGGACTTGTCCGACCTGACTGGCCTCTTGAGGCTGAATGGAAAGCAAAGCCGAATGCACACAAATCATTAAAAAAGCAGAAGAGGGTGAGTTCCTTTGAGTTTAGTAACACAACTAGCTGTGAGCTGTCACAGCTGGAGGGTAAAGTTGCAATGGCAGCAGCCAGCGTCCAGAGCACTCAAAGTGGGGTTACAGACATTCAGAAACGAATCGCTGCTTTGAGTGCAGCAGGGATGACAGTGGAGACATCCCGCAGACGGGAGGCAGCAATGAAGCAAGATCATTACGGAAGTTGGTCACTATGTGAAACAATGACAGAACAATTTCAAAACAATGACAGATTCACATAATGCATATTTAATGTTC

Function

symbol description
mlphb Predicted to enable actin binding activity and myosin binding activity. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cortical actin cytoskeleton. Human ortholog(s) of this gene implicated in Griscelli syndrome type 3. Orthologous to human MLPH (melanophilin).

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0030864 cortical actin cytoskeleton cellular_component
GO:0017022 myosin binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070803-2 Predicted to enable actin binding activity and myosin binding activity. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cortical actin cytoskeleton. Human ortholog(s) of this gene implicated in Griscelli syndrome type 3. Orthologous to human MLPH (melanophilin).

Ensembl:

ensembl_id ENSDARG00000062481

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073104 False 1838 mRNA 0.46 12 24008879 24021162
TCONS_00073105 False 1874 mRNA 0.46 13 24008879 24023353
TCONS_00073106 False 1889 mRNA 0.46 15 24009013 24023369
TCONS_00073107 True 627 lncRNA 0.44 4 24020513 24023369

Neighbor

gene id symbol gene type direction distance location
XLOC_037137 cops8 coding upstream 102674 23895711 ~ 23906205 (+)
XLOC_037138 trim63b coding upstream 106664 23900703 ~ 23902215 (+)
XLOC_037136 NA coding upstream 121598 23884356 ~ 23887281 (+)
XLOC_037135 ints6 coding upstream 167175 23825440 ~ 23841704 (+)
XLOC_037134 dhrs12 coding upstream 196243 23808546 ~ 23812636 (+)
XLOC_037140 prlh coding downstream 1658 24025027 ~ 24025404 (+)
XLOC_037141 lrrfip1a coding downstream 42486 24065855 ~ 24115589 (+)
XLOC_037142 maip1 coding downstream 97667 24121036 ~ 24123931 (+)
XLOC_037143 pgap1 coding downstream 102076 24125445 ~ 24145714 (+)
XLOC_037144 hecw2a coding downstream 135911 24159280 ~ 24192145 (+)
XLOC_037131 BX957274.1 non-coding upstream 308423 23696924 ~ 23700456 (+)
XLOC_037127 NA non-coding upstream 552534 23363848 ~ 23456345 (+)
XLOC_037128 CR392363.1 non-coding upstream 641670 23364242 ~ 23367209 (+)
XLOC_037126 NA non-coding upstream 674900 23321834 ~ 23333979 (+)
XLOC_037147 BX571803.2 non-coding downstream 360765 24384134 ~ 24387531 (+)
XLOC_037148 BX571803.4 non-coding downstream 400423 24423792 ~ 24427240 (+)
XLOC_037151 BX323457.3 non-coding downstream 1043292 25066661 ~ 25067730 (+)
XLOC_037152 BX323457.2 non-coding downstream 1050170 25073539 ~ 25074199 (+)
XLOC_037153 NA non-coding downstream 1055794 25079163 ~ 25080305 (+)

Expression


Co-expression Network