XLOC_037145 (stk17b)


Basic Information

Item Value
gene id XLOC_037145
gene name stk17b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 24192370 ~ 24201159 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073128
ACTGGCATCAGGGCAGAATTTGAAACTGAAGAGCCGGCGGACAAGAGGCAAACTGAATCCAGGAATCCAAAAACCGACTTTACCTCAGCATGAATTAGCCGTCGAACGTGTTTACTTGCGGCTCAACTTTATCCAGAGTTCATTGAACAGTTTGTCTGCTGAACTAACGTTACAGCTGTTGTTCCCTTGAGAAGAGGAAGAGGGTGTCCGCTCTAAACTTTATGTCGTGATTTTGTCCTGCGTGTAAGAAAGagctgtctctctgtctgtcggTCGGTTGGAGTGTATTTTGAACAAAATGAGGCGAATCTGTTCATGCTTTCGTTTGAGTAAAGAACGGAGTTTAATCAAGAACTTTTAGCGGTGTCGTCGAGGGCTAGCCTTACGTGAGCTAATCTGCGCTAGCTAACTTAGAGGCTCTTAGCATCAGTTAACTTACGGTGTCCAAGCACAACTAACAGTTAAACTCACGGCAGGGAAGCGAATAGATTTGTTGTCAACATTTGCTAAACAACCGCGAACTAAACACTGTCTTtctgaaaccttttttttaaacggTGTGAGCACCGCCAGGAGGCCGGTGGCAGTGggtgttttttttacttcttcCTGGTGGTGACTGAACATGAGCAGTGCTGGTTAAGTGATAACAACAGTCTGCACACTTGACTGGACACTGGTGGCGATGGCCCGGAGGAGGCTGGACAGTCGCAGTGGGTCCTCGGCTCTGCTGTCAGAGATTCACTCTCACATCCACACGGATCCTCTGGACACCCTGTTTGACATAGGCAAAGAACTGGGCAGGGGGAAGTTTGCAGTGGTTAAGCGTTGTGTGGAAAAGACCACGGGTAAAGTCTTTGCTGCAAAGTTCATCAAGAAGCGGCGACGAGGTCGTGACTGCAGAGCAGATGTCATTCACGAGATTGCTGTTTTAGAGGCAGCCAAGAACAACCCTCGGGTGGTGAACTTGAACGCTGTATATGAGACTGATTATGACCTAGTTCTGATGCTGGAATTCGCGGCGGGTGGTGAGATATTTAACCACTGTGTGTCAGATGAGCTGCTGCCTGAAGGTCAGATCACTCGTCTCATCAGACAGATGCTTGAGGGCATTCACCTACTGCACCAGAGCAGCGTGGTCCACCTGGACCTAAAGCCCCAGAATATTCTCTTGACAAGTCTGAGCCCTTTGGGGGATATAAAGATAGTGGATTTTGGATTGGCCCGCAGGTTGGGTTCTGCTGGGGAGCTCCGAGAGATTCTGGGAACCCCTGAGTATGTAGCTCCTGAAATTCTGAACTATGAACCAATCACCACAGCAACAGACCTCTGGAGTGTGGGTGTGATCACTTATATGCTGGTGACAGGAGAGTCTCCCTTCGCTGGCGATGACAAACAAGAGACCTTCCTAAATGTTTCCCAGGTGAACGTGGAATATAGCAGAGAGACCTTCTCAAGGGTCTCTGAACTGGCTGTCGACTTCATCCGGAAACTGCTGGTCAAAGCGCCAGAAGACCGTCCCAGTGCAGCCGATTGCATGACCCATCCCTGGCTGTGGCTTCAGTATCCAGGTTCTGATCCGGTCCCCATGACCCCACGCACTCCTCGGGAAAGGAGTTTTGGTGGGAAGTGGTCTGCTCCACCTGAGGACCCTGAAGACAAGGAGAACATTCTGGACTCGCCGCACGCCAAGAGGTTTCGTTTCGACGAGGACATGTCAGCCACGGGCGACGGTGACAACTTATGCTGATCCTAAAGGGAAAGCCCCTTGCACTATAGAGCATTATGTCACATTTGTGGCCTCTTTTTTGCTGGCTCAAGTATTGGCCCACACAGCACCAGCAAACATGCTTCTGTCCTAAAGCTGTTTTCACTATCCTTTGGTTGACCAAAGATGATCATTTCAAAAAAGGGCAAAATCTGGTGTAATATTATAGTAGTGAGAATCTAAATATGTATGTTGCTGTCCTGTTTCAAGATGAGCTTTTTCATGTCatgtttgcattttaaattattaatttgaacATATTGTCTATTTTAATTGATATTCAGTATCGATTTTATTTCCTGCAGCCCTTAGATTCGATTACTGCACTTAAACAAGTCGGAGTGCTCAAGTGTGCCAGGGGTTTTAAAGGGTCACTTCACCACAGAATTACAATTCTGGCTTATTTTACTTGCCTTGTTGTTTTTGGTCAAATCAGACAGACACCATTGCTCAAATCTCTTCTAcacccaaaacttaaaaaaaaaaaaaaa
>TCONS_00073129
CTGGACACTGGTGGCGATGGCCCGGAGGAGGCTGGACAGTCGCAGTGGGTCCTCGGCTCTGCTGTCAGAGATTCACTCTCACATCCACACGGATCCTCTGGACACCCTGTTTGACATAGGCAAAGAACTGGGCAGGGGGAAGTTTGCAGTGGTTAAGCGTTGTGTGGAAAAGACCACGGGTAAAGTCTTTGCTGCAAAGTTCATCAAGAAGCGGCGACGAGGTCGTGACTGCAGAGCAGATGTCATTCACGAGATTGCTGTTTTAGAGGCAGCCAAGAACAACCCTCGGGTGGTGAACTTGAACGCTGTATATGAGACTGATTATGACCTAGTTCTGATGCTGGAATTCGCGGCGGGTGGTGAGATATTTAACCACTGTGTGTCAGATGAGCTGCTGCCTGAAGGTCAGATCACTCGTCTCATCAGACAGATGCTTGAGGGCATTCACCTACTGCACCAGAGCAGCGTGGTCCACCTGGACCTAAAGGTCAGATACATGGCTGCTTTTAACA

Function

symbol description
stk17b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1499 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

Ensembl:

ensembl_id ENSDARG00000014348

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073128 False 2259 mRNA 0.47 7 24192370 24201159
TCONS_00073129 True 512 lncRNA 0.52 3 24193039 24197859

Neighbor

gene id symbol gene type direction distance location
XLOC_037144 hecw2a coding upstream 225 24159280 ~ 24192145 (+)
XLOC_037143 pgap1 coding upstream 46656 24125445 ~ 24145714 (+)
XLOC_037142 maip1 coding upstream 68439 24121036 ~ 24123931 (+)
XLOC_037141 lrrfip1a coding upstream 76781 24065855 ~ 24115589 (+)
XLOC_037140 prlh coding upstream 166966 24025027 ~ 24025404 (+)
XLOC_037146 zgc:153901 coding downstream 7374 24208533 ~ 24212884 (+)
XLOC_037147 BX571803.2 coding downstream 182975 24384134 ~ 24387531 (+)
XLOC_037148 BX571803.4 coding downstream 222633 24423792 ~ 24427240 (+)
XLOC_037149 CT030712.1 coding downstream 507494 24708653 ~ 24710074 (+)
XLOC_037150 slc39a10 coding downstream 719518 24920677 ~ 24951662 (+)
XLOC_037136 NA non-coding upstream 305089 23884356 ~ 23887281 (+)
XLOC_037131 BX957274.1 non-coding upstream 491914 23696924 ~ 23700456 (+)
XLOC_037127 NA non-coding upstream 736025 23363848 ~ 23456345 (+)
XLOC_037128 CR392363.1 non-coding upstream 825161 23364242 ~ 23367209 (+)
XLOC_037126 NA non-coding upstream 858391 23321834 ~ 23333979 (+)
XLOC_037151 BX323457.3 non-coding downstream 865502 25066661 ~ 25067730 (+)
XLOC_037152 BX323457.2 non-coding downstream 872380 25073539 ~ 25074199 (+)
XLOC_037153 NA non-coding downstream 878004 25079163 ~ 25080305 (+)

Expression


Co-expression Network