XLOC_037171 (GTPBP8)


Basic Information

Item Value
gene id XLOC_037171
gene name GTPBP8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 27329640 ~ 27337185 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073173
CACTCGTTTGTTTCCTCCGGATTGATTCTGATGTAGTACGCGCATGTACACAAGTACGATacatttaaaatcaataaatgagACATTTTTACGGTCTTTTTACAAATAGAAATTGGGTTTATTTCAGGTTTAATagttataaaatttaattttcagCCCAGCGAATTTAACCTGAAGATGTTATCGGATTTGCAGTAAGATGTCTCTAtgtgaccattttttttcttgcagCATGTGTACAACAAAAACGTtatgaaatgtttttataataatttgaagTATAACATATATGTGAATCCCGTGTAGACGTAAACCATGGTAACACTGGATAAAAATAATCAATACTTGATTGTATTTCttagttaaattattaaaaattcaagaaaaaaaataataaaacaaggcAACTTTAACTCAGAATTCCCATGTAACAGATTACAATGAATCAGACATCAGTGCAGTTAAAAAACTGATTTCCAAAGTCAACCAATCTCATCTTTAATGAACTGATCCAACAAAATGCTGAGGATAAAGGCACTGGCACCACTGCAGACACGAGTATCGTGTTGGCTTTTGGTCCTTCAGAGAGGTCATCGTCTGGCCTCCATCAAACATGTGTGTCAGCTCTCAGAGAGGAAGCGTCAGAGTCTGCTGTACCCTTTTAGTGATCTGGAGGGGCACCTGTTCTCACAGGTCAATCAGGCACAATTCAAGATCTTCCATCCCAGTTTGGAGGAACTCCGCCAGGCAGAGACACTTTTCACTCCCTCCTCTAAACATGTCATCAACTACTCGACTTCTGCTGTCAGGATGGACCATGTCCCTATTCTTAAACAGCCTGAGGTGTGTTTTATGGGCAGGAGTAATGTGGGGAAGTCTTCTCTCATCCGTGCCTTATTCTCTCTTGCACCAGAGGTGGAAGTGCGGGTCTCTAAAACTCCAGGTCACACCAAAAAGCTCAATTTCTTTACTGTGGGAAAAGCGTTTACTCTAGTAGACATGCCTGGCTATGGACACATGGCACCACAGGACTTTGTAGAGATGGTTGAACCGTATCTTCAGGAGCGCCACAATTTGGCGAGGACGTTCTTGCTGGTGGATGCAAGTGCAGGATTGCAGAGTACTGATTTAGTTGCTGTGGAGATGTTTGAAGAATTTAATTTGCCTTATGTGctgGTGGTAACCAAGATAGACAGAACCCGACAGGGTGCTTTGTTGGCTCTTGCTCTGGAGCTTCAGGACTTCATCAAAAAGCAAACCACAGCTTGTTTCCCACAACCATTTTTAGTGAGTTCAGTCCAATTCTCCGGGATTCACCTGCTCAGATGTTTCATAGCACACGTAACTGGGAAACAACTGCTTTCTGCTAAACAATCATGAATGTACAGGACTGCCATGCACTGACACCACGTGGACAAATCTCATTtccaaaacacattttgaaaaagACCAATTTTAAGCATAGAAATGTTGATGTCGAGTCTGTGCATTAATGACTAATGCAGAGGAATCATGTTGTTACTGGTTTCAGGATTCATTCAACCCTGTATGAACTCCATGAATGATCCAGGATTGAGTGTGAGTGAGCTTTCAGAGGAAATaagaaaaattttaatttttgtaaatggTATCATGGCATAGTACATACACACTGATATTAGTCGCagtgattaaaaaaatgaagaaatttaCCATGTGGAATTAACTCCATGCTTCATATACAGATTGTATAAATTCAACCTAAAAGTTACTGTTGAAACCTGTATTTGCTGTAGAATAATTTTCATAATCgttcaaaatcatttatttttgtgcatttcaTCGATCTATTTCATTTAGTCTATGACATTTCAGTCAAATCAATTAAATACTATGACAGTTA

Function

symbol description
gtpbp8 Predicted to enable GTP binding activity. Orthologous to human GTPBP8 (GTP binding protein 8 (putative)).

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000075033

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073173 True 1882 mRNA 0.39 6 27329640 27337185

Neighbor

gene id symbol gene type direction distance location
XLOC_037170 NA coding upstream 5925 27314951 ~ 27323715 (+)
XLOC_037169 NA coding upstream 28075 27300664 ~ 27301565 (+)
XLOC_037168 BX928746.1 coding upstream 47204 27282322 ~ 27282436 (+)
XLOC_037167 FP101883.1 coding upstream 104506 26896785 ~ 27225134 (+)
XLOC_037165 NA coding upstream 534219 26604063 ~ 26795421 (+)
XLOC_037172 slc10a2 coding downstream 2320 27339505 ~ 27344683 (+)
XLOC_037173 NA coding downstream 11445 27348630 ~ 27349361 (+)
XLOC_037174 tlr20.2 coding downstream 15113 27352298 ~ 27355333 (+)
XLOC_037175 tlr20.3 coding downstream 34055 27371240 ~ 27371879 (+)
XLOC_037176 tlr20.3 coding downstream 41829 27379014 ~ 27379739 (+)
XLOC_037177 NA non-coding downstream 74146 27411331 ~ 27416612 (+)
XLOC_037180 BX511265.1 non-coding downstream 445319 27782504 ~ 27787376 (+)
XLOC_037181 NA non-coding downstream 470342 27807527 ~ 27811141 (+)
XLOC_037182 BX511265.5 non-coding downstream 480740 27817925 ~ 27822574 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_06253421_06255264 NA coding CI01000009 null 6253421 ~ 6255946 (-)