G1798473


Basic Information

Item Value
gene id G1798473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31031741 ~ 31031995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2058130
aggtaggccttcaaatacatccacaggtacacctccaattgaattgactcaaattatgtcaattagcctatcagaagcttcaaaagaCATGACgtaattttcttgaattttccaagctgtttaaaggcacagtcaacttagtgaatgtaaacttctgacccactggaattgtgatacagtgaattaaaagtgaaataatctgtatgtaaacaattgttgtaaaaattacttgtgtcatgcacaaagtacatgtcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2058130 True 255 lncRNA 0.35 1 31031741 31031995

Neighbor

gene id symbol gene type direction distance location
rl31 rl31 coding upstream 28098 30999685 ~ 31003643 (+)
LOC118943732 NA coding upstream 29120 31002485 ~ 31002621 (+)
LOC100136146 LOC106582249 coding upstream 36432 30976895 ~ 30995309 (+)
LOC110501741 nek5 coding upstream 71021 30948656 ~ 30960720 (+)
LOC110501739 LOC106582246 coding upstream 87810 30913631 ~ 30943931 (+)
LOC110501747 LOC106582251 coding downstream 5131 31037126 ~ 31039631 (+)
LOC110501749 LOC106582255 coding downstream 35498 31067493 ~ 31074290 (+)
LOC110501750 LOC106582256 coding downstream 57020 31089015 ~ 31187398 (+)
LOC110502091 LOC106582258 coding downstream 174393 31206388 ~ 31237363 (+)
dnajc10 LOC106582260 coding downstream 217612 31249607 ~ 31267129 (+)
G1798447 NA non-coding upstream 55262 30976032 ~ 30976479 (+)
G1798446 NA non-coding upstream 59893 30971611 ~ 30971848 (+)
G1798403 sucla2 non-coding upstream 130356 30900985 ~ 30901385 (+)
G1798195 NA non-coding upstream 598908 30432608 ~ 30432833 (+)
G1798194 NA non-coding upstream 599226 30428536 ~ 30432515 (+)
G1798474 NA non-coding downstream 884 31032879 ~ 31033235 (+)
G1798475 NA non-coding downstream 1946 31033941 ~ 31034195 (+)
G1798489 NA non-coding downstream 10483 31042478 ~ 31042685 (+)
G1798490 NA non-coding downstream 10753 31042748 ~ 31042973 (+)
G1798487 NA non-coding downstream 141147 31173142 ~ 31173774 (+)
G1798397 NA other upstream 140674 30888661 ~ 30891067 (+)
G1798168 NA other upstream 485787 30500656 ~ 30545954 (+)
LOC118943632 LOC100194703 other upstream 1106359 29917773 ~ 29933035 (+)
G1797582 NA other upstream 1286887 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 2021468 28997763 ~ 29010281 (+)
G1798579 NA other downstream 214486 31246481 ~ 31292205 (+)
G1798597 NA other downstream 261557 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 1335641 32317123 ~ 32374208 (+)
G1800754 NA other downstream 1878798 32910793 ~ 32914182 (+)
LOC110501795 LOC106596205 other downstream 4708444 35740427 ~ 35760519 (+)

Expression


Co-expression Network