Gene
RNA
| Item | Value |
|---|---|
| gene id | G1798487 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31173142 ~ 31173774 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058153 | True | 567 | lncRNA | 0.41 | 2 | 31173142 | 31173774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501749 | LOC106582255 | coding | upstream | 98852 | 31067493 ~ 31074290 (+) |
| LOC110501747 | LOC106582251 | coding | upstream | 133511 | 31037126 ~ 31039631 (+) |
| rl31 | rl31 | coding | upstream | 169499 | 30999685 ~ 31003643 (+) |
| LOC118943732 | NA | coding | upstream | 170521 | 31002485 ~ 31002621 (+) |
| LOC100136146 | LOC106582249 | coding | upstream | 177833 | 30976895 ~ 30995309 (+) |
| LOC110502091 | LOC106582258 | coding | downstream | 32614 | 31206388 ~ 31237363 (+) |
| dnajc10 | LOC106582260 | coding | downstream | 75833 | 31249607 ~ 31267129 (+) |
| LOC110501756 | LOC106586411 | coding | downstream | 190768 | 31364542 ~ 31366811 (+) |
| pde1a | LOC106582264 | coding | downstream | 284237 | 31458011 ~ 31535521 (+) |
| neurod1 | LOC106582267 | coding | downstream | 461736 | 31635510 ~ 31638598 (+) |
| G1798490 | NA | non-coding | upstream | 130169 | 31042748 ~ 31042973 (+) |
| G1798489 | NA | non-coding | upstream | 130457 | 31042478 ~ 31042685 (+) |
| G1798475 | NA | non-coding | upstream | 138947 | 31033941 ~ 31034195 (+) |
| G1798474 | NA | non-coding | upstream | 139907 | 31032879 ~ 31033235 (+) |
| G1798473 | NA | non-coding | upstream | 141147 | 31031741 ~ 31031995 (+) |
| G1798549 | NA | non-coding | downstream | 16663 | 31190437 ~ 31190737 (+) |
| G1798550 | NA | non-coding | downstream | 17017 | 31190791 ~ 31191144 (+) |
| G1798551 | LOC100194703 | non-coding | downstream | 18045 | 31191819 ~ 31192287 (+) |
| G1798596 | NA | non-coding | downstream | 110317 | 31284091 ~ 31289666 (+) |
| G1798600 | LOC106586471 | non-coding | downstream | 116221 | 31289995 ~ 31291207 (+) |
| G1798397 | NA | other | upstream | 282075 | 30888661 ~ 30891067 (+) |
| G1798168 | NA | other | upstream | 627188 | 30500656 ~ 30545954 (+) |
| LOC118943632 | LOC100194703 | other | upstream | 1247760 | 29917773 ~ 29933035 (+) |
| G1797582 | NA | other | upstream | 1428288 | 29744192 ~ 29744854 (+) |
| LOC110501700 | LOC106582186 | other | upstream | 2162869 | 28997763 ~ 29010281 (+) |
| G1798579 | NA | other | downstream | 72707 | 31246481 ~ 31292205 (+) |
| G1798597 | NA | other | downstream | 119778 | 31293552 ~ 31297419 (+) |
| LOC110501767 | LOC106582273 | other | downstream | 1193862 | 32317123 ~ 32374208 (+) |
| G1800754 | NA | other | downstream | 1737019 | 32910793 ~ 32914182 (+) |
| LOC110501795 | LOC106596205 | other | downstream | 4566665 | 35740427 ~ 35760519 (+) |
