G1798490


Basic Information

Item Value
gene id G1798490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31042748 ~ 31042973 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2058156
attacagatacttttgaaaaactagatgattatgTTGAAGATTACTTTTCTGCCAAAAAAGTATTTGACACTTCTCtcttttctcaatgacattcataCATCATTGAAAATAGGTGCAAATTTAAATTTGTTCAAGGTGAGCAAGTCTGACCataaatcagagaccactatgaattttaaataaactactgacagtgtcaccaacaaagcacccccacaccatcgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2058156 True 226 lncRNA 0.34 1 31042748 31042973

Neighbor

gene id symbol gene type direction distance location
LOC110501747 LOC106582251 coding upstream 3117 31037126 ~ 31039631 (+)
rl31 rl31 coding upstream 39105 30999685 ~ 31003643 (+)
LOC118943732 NA coding upstream 40127 31002485 ~ 31002621 (+)
LOC100136146 LOC106582249 coding upstream 47439 30976895 ~ 30995309 (+)
LOC110501741 nek5 coding upstream 82028 30948656 ~ 30960720 (+)
LOC110501749 LOC106582255 coding downstream 24520 31067493 ~ 31074290 (+)
LOC110501750 LOC106582256 coding downstream 46042 31089015 ~ 31187398 (+)
LOC110502091 LOC106582258 coding downstream 163415 31206388 ~ 31237363 (+)
dnajc10 LOC106582260 coding downstream 206634 31249607 ~ 31267129 (+)
LOC110501756 LOC106586411 coding downstream 321569 31364542 ~ 31366811 (+)
G1798489 NA non-coding upstream 63 31042478 ~ 31042685 (+)
G1798475 NA non-coding upstream 8553 31033941 ~ 31034195 (+)
G1798474 NA non-coding upstream 9513 31032879 ~ 31033235 (+)
G1798473 NA non-coding upstream 10753 31031741 ~ 31031995 (+)
G1798447 NA non-coding upstream 66269 30976032 ~ 30976479 (+)
G1798487 NA non-coding downstream 130169 31173142 ~ 31173774 (+)
G1798549 NA non-coding downstream 147464 31190437 ~ 31190737 (+)
G1798550 NA non-coding downstream 147818 31190791 ~ 31191144 (+)
G1798551 LOC100194703 non-coding downstream 148846 31191819 ~ 31192287 (+)
G1798596 NA non-coding downstream 241118 31284091 ~ 31289666 (+)
G1798397 NA other upstream 151681 30888661 ~ 30891067 (+)
G1798168 NA other upstream 496794 30500656 ~ 30545954 (+)
LOC118943632 LOC100194703 other upstream 1117366 29917773 ~ 29933035 (+)
G1797582 NA other upstream 1297894 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 2032475 28997763 ~ 29010281 (+)
G1798579 NA other downstream 203508 31246481 ~ 31292205 (+)
G1798597 NA other downstream 250579 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 1324663 32317123 ~ 32374208 (+)
G1800754 NA other downstream 1867820 32910793 ~ 32914182 (+)
LOC110501795 LOC106596205 other downstream 4697466 35740427 ~ 35760519 (+)

Expression


Co-expression Network