G1804830


Basic Information

Item Value
gene id G1804830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 35824088 ~ 35827883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2064946
ctgccaccaccatgttttacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaaaaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2064946 True 200 lncRNA 0.41 2 35824088 35827883

Neighbor

gene id symbol gene type direction distance location
LOC110501798 NA coding upstream 9176 35783183 ~ 35814912 (+)
LOC110501797 LOC106582303 coding upstream 43544 35769181 ~ 35780544 (+)
LOC110501795 LOC106596205 coding upstream 63569 35740427 ~ 35760519 (+)
LOC118943586 NA coding upstream 774630 35047732 ~ 35049458 (+)
LOC110501793 LOC106582300 coding upstream 1033586 34781505 ~ 34790502 (+)
LOC110502095 LOC106582360 coding downstream 115627 35943510 ~ 36060137 (+)
LOC110501801 tsn coding downstream 415272 36243155 ~ 36247834 (+)
LOC118943606 NA coding downstream 511871 36339754 ~ 36345450 (+)
LOC110501802 LOC106582356 coding downstream 525787 36353670 ~ 36359762 (+)
LOC110502098 LOC106586421 coding downstream 534219 36362102 ~ 36376836 (+)
G1804655 LOC106582302 non-coding upstream 123837 35699520 ~ 35700251 (+)
G1804653 NA non-coding upstream 124651 35697608 ~ 35699437 (+)
G1804125 NA non-coding upstream 444545 35374594 ~ 35379543 (+)
G1804962 NA non-coding downstream 140659 35968542 ~ 35968910 (+)
G1804971 NA non-coding downstream 155559 35983442 ~ 35983644 (+)
G1804973 NA non-coding downstream 156936 35984819 ~ 35985033 (+)
G1804974 NA non-coding downstream 157577 35985460 ~ 35985688 (+)
G1804981 NA non-coding downstream 182000 36009883 ~ 36010119 (+)
G1800754 NA other upstream 2909906 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 3449907 32317123 ~ 32374208 (+)
G1798597 NA other upstream 4526669 31293552 ~ 31297419 (+)
G1798579 NA other upstream 4531883 31246481 ~ 31292205 (+)
G1804873 NA other downstream 46679 35874562 ~ 35875452 (+)
G1805191 NA other downstream 535713 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 607117 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 2251983 38079807 ~ 38213191 (+)
G1807306 NA other downstream 2471244 38282124 ~ 38316253 (+)

Expression


Co-expression Network