G1804962


Basic Information

Item Value
gene id G1804962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 35968542 ~ 35968910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2065091
caaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagtatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2065091 True 369 lncRNA 0.43 1 35968542 35968910

Neighbor

gene id symbol gene type direction distance location
LOC110501798 NA coding upstream 153630 35783183 ~ 35814912 (+)
LOC110501797 LOC106582303 coding upstream 187998 35769181 ~ 35780544 (+)
LOC110501795 LOC106596205 coding upstream 208023 35740427 ~ 35760519 (+)
LOC118943586 NA coding upstream 919084 35047732 ~ 35049458 (+)
LOC110501793 LOC106582300 coding upstream 1178040 34781505 ~ 34790502 (+)
LOC110501801 tsn coding downstream 274245 36243155 ~ 36247834 (+)
LOC118943606 NA coding downstream 370844 36339754 ~ 36345450 (+)
LOC110501802 LOC106582356 coding downstream 384760 36353670 ~ 36359762 (+)
LOC110502098 LOC106586421 coding downstream 393192 36362102 ~ 36376836 (+)
LOC110501803 LOC106582352 coding downstream 410596 36379506 ~ 36406219 (+)
G1804830 NA non-coding upstream 140659 35824088 ~ 35827883 (+)
G1804655 LOC106582302 non-coding upstream 268291 35699520 ~ 35700251 (+)
G1804653 NA non-coding upstream 269105 35697608 ~ 35699437 (+)
G1804971 NA non-coding downstream 14532 35983442 ~ 35983644 (+)
G1804973 NA non-coding downstream 15909 35984819 ~ 35985033 (+)
G1804974 NA non-coding downstream 16550 35985460 ~ 35985688 (+)
G1804981 NA non-coding downstream 40973 36009883 ~ 36010119 (+)
G1804988 NA non-coding downstream 51190 36020100 ~ 36020367 (+)
G1804873 NA other upstream 93090 35874562 ~ 35875452 (+)
G1800754 NA other upstream 3054360 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 3594361 32317123 ~ 32374208 (+)
G1798597 NA other upstream 4671123 31293552 ~ 31297419 (+)
G1805191 NA other downstream 394686 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 466090 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 2110956 38079807 ~ 38213191 (+)
G1807306 NA other downstream 2330217 38282124 ~ 38316253 (+)
G1807376 NA other downstream 2437227 38406137 ~ 38411163 (+)

Expression


Co-expression Network