G1805222


Basic Information

Item Value
gene id G1805222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36510868 ~ 36512002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2065390
cacacatacaagcTGCATACAGGTTGCTGATGCGTGGTTGCTGATGGAACATATACATTACAAGTTAAATCCATtaaatatacaccatcacaataaatacatttcatgtacaccgtcacAATAAATCCATTTCATGTACACCGTCTCAATACATCCATTTAatatacaccgtcacaataaatccatttaatatacaccgtcacaataaatccatttaatgtacaccgtcacaataaatccatttcaTGTACACCGTCTCAATACATCCATTTAatatacaccgtcacaataaatccatttaatatacaccgtcacaatacatccatttaatatacaccgtcacaataaatccatttaatatacaccgtcacaataaatccatttaatgtacaccgtcacaataaatccatttaatgtacaccgtcacaataaatccatttcatgtacaccgtcacaataaatccatttaatgtacaccatcacaataaatccatttaatgtacaccatcacaataaatccatttaatatacaccgtcacaataaatccatttaatgtacaccgtcacaatacatccatttaatgtacaccgtcacaataaatccatttcatgtacaccgtcacaatacatccatttcatgtacaccgtcacaatacatccatttaatgtacaccgtcacaataaatccatttaatgtacaccgtcacaatacatccatttcatgtacaccgtcacaatacatccatttaatgtacaccgtcacaatacatccatttaatgtacaccgtcacaatacatccatttaatgtacaccgtcacaataaatccatttcatgtacaccgtcacaataaatccatttaatgtacaccgtcacaataaatccatttaatgtacaccgtcacaataaatccatttaatatacaccttcacaatacatccatttaatatacaccatcacaataaatccatgtaatatacaccgtcacaataaatccatttcatgtacaccgtcacaatacatccatttaatatacaccgtcacaataaatccatttcatgtacaccgtcacaatacatc

Function

NR:

description
extensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2065390 True 1079 lncRNA 0.33 2 36510868 36512002

Neighbor

gene id symbol gene type direction distance location
LOC110501803 LOC106582352 coding upstream 104649 36379506 ~ 36406219 (+)
LOC110502098 LOC106586421 coding upstream 134032 36362102 ~ 36376836 (+)
LOC110501802 LOC106582356 coding upstream 151106 36353670 ~ 36359762 (+)
LOC118943606 NA coding upstream 165418 36339754 ~ 36345450 (+)
LOC110501801 tsn coding upstream 263034 36243155 ~ 36247834 (+)
LOC110501807 pdia5 coding downstream 326712 36838714 ~ 36917226 (+)
LOC110501808 sec22a coding downstream 437457 36949459 ~ 36970391 (+)
LOC110501811 LOC106586394 coding downstream 608933 37120935 ~ 37146250 (+)
LOC110501812 LOC106582346 coding downstream 641566 37153568 ~ 37221890 (+)
LOC110501814 LOC106582344 coding downstream 710659 37222661 ~ 37238631 (+)
G1805267 NA non-coding upstream 1317 36506127 ~ 36509551 (+)
G1805246 NA non-coding upstream 35889 36474659 ~ 36474979 (+)
G1805234 NA non-coding upstream 52412 36457793 ~ 36458456 (+)
G1805231 NA non-coding upstream 59416 36451061 ~ 36451452 (+)
G1805209 hspbap1 non-coding upstream 85213 36415300 ~ 36425655 (+)
G1805289 NA non-coding downstream 40697 36552699 ~ 36555929 (+)
G1805295 NA non-coding downstream 52028 36564030 ~ 36564930 (+)
G1805312 sema5b non-coding downstream 76881 36588883 ~ 36630226 (+)
G1805352 NA non-coding downstream 130541 36642543 ~ 36642910 (+)
G1805400 NA non-coding downstream 200217 36712219 ~ 36719664 (+)
LOC110501805 dirc2 other upstream 67791 36435000 ~ 36520762 (+)
G1805191 NA other upstream 146938 36363596 ~ 36363930 (+)
G1804873 NA other upstream 635416 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 751442 35740427 ~ 35760519 (+)
G1800754 NA other upstream 3596686 32910793 ~ 32914182 (+)
LOC110501842 LOC106586352 other downstream 1567864 38079807 ~ 38213191 (+)
G1807306 NA other downstream 1787125 38282124 ~ 38316253 (+)
G1807376 NA other downstream 1894135 38406137 ~ 38411163 (+)
G1807566 NA other downstream 2350738 38862740 ~ 38863136 (+)
G1808209 NA other downstream 2637078 39149080 ~ 39151333 (+)

Expression


Co-expression Network