G1805478


Basic Information

Item Value
gene id G1805478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36854582 ~ 36855209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2065661
aatcatccctagCTTCCAATTCGCAAATTcatcacccctccccttctctcccctgtaactagtTCCAGGTCGttactgtaaatgagaatgtgttctcagtcaacttacctggtaaaataagggtaaaaaaaaaattggggacgTGAGGCTGAATGTACTTATATGGATTTGTGTTCTTTACATAAACCTGTCTAATCAACTCCCTCTACAGACtagtgtgtgtctgtacagtacCCCTCATTCTAATCAACTCCCTCTACAGACAAgtgtgtctgtacagtacACCTCATTCTAATCAACTCCCTCTACAGACtagtgtgtgtctgtacagtacCCCTCAGTCTAATCAACTCCCTCTACAGACTAGTGTGGGTCTGTACAGTACACCTCAGTCTAATCAACTCCCTCTACAGACtagtgtgtgtctgtacagtacACCTCATTCTAATCAACCCCCTCTACAGACTTGTTTCTGTATATGTTTGTTGTGACAGAATGATGTTGAATAACAGACAGGGTCTCCATGTCTGGTGACAGTATTCGTGTCTCTGCAGAGATCTGATTAACAAGACTTGATGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2065661 True 579 lncRNA 0.42 2 36854582 36855209

Neighbor

gene id symbol gene type direction distance location
LOC110501805 dirc2 coding upstream 333820 36435000 ~ 36520762 (+)
LOC110501803 LOC106582352 coding upstream 448363 36379506 ~ 36406219 (+)
LOC110502098 LOC106586421 coding upstream 477746 36362102 ~ 36376836 (+)
LOC110501802 LOC106582356 coding upstream 494820 36353670 ~ 36359762 (+)
LOC118943606 NA coding upstream 509132 36339754 ~ 36345450 (+)
LOC110501808 sec22a coding downstream 94250 36949459 ~ 36970391 (+)
LOC110501811 LOC106586394 coding downstream 265726 37120935 ~ 37146250 (+)
LOC110501812 LOC106582346 coding downstream 298359 37153568 ~ 37221890 (+)
LOC110501814 LOC106582344 coding downstream 367452 37222661 ~ 37238631 (+)
LOC110501815 LOC100194727 coding downstream 399593 37254802 ~ 37357452 (+)
G1805400 NA non-coding upstream 134918 36712219 ~ 36719664 (+)
G1805352 NA non-coding upstream 211672 36642543 ~ 36642910 (+)
G1805312 sema5b non-coding upstream 224356 36588883 ~ 36630226 (+)
G1805295 NA non-coding upstream 289652 36564030 ~ 36564930 (+)
G1805289 NA non-coding upstream 298653 36552699 ~ 36555929 (+)
G1805487 NA non-coding downstream 65119 36920328 ~ 36921951 (+)
G1805500 NA non-coding downstream 86852 36942061 ~ 36943349 (+)
G1805533 NA non-coding downstream 144636 36999845 ~ 37051312 (+)
G1805697 NA non-coding downstream 480768 37335977 ~ 37337154 (+)
G1805191 NA other upstream 490652 36363596 ~ 36363930 (+)
G1804873 NA other upstream 979130 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 1095156 35740427 ~ 35760519 (+)
G1800754 NA other upstream 3940400 32910793 ~ 32914182 (+)
LOC110501842 LOC106586352 other downstream 1224657 38079807 ~ 38213191 (+)
G1807306 NA other downstream 1443918 38282124 ~ 38316253 (+)
G1807376 NA other downstream 1550928 38406137 ~ 38411163 (+)
G1807566 NA other downstream 2007531 38862740 ~ 38863136 (+)
G1808209 NA other downstream 2293871 39149080 ~ 39151333 (+)

Expression


Co-expression Network