G1808792


Basic Information

Item Value
gene id G1808792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39703636 ~ 39704163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2069491
CTGCCTCTGTGTCCTCTACCCAGTACCCACTGCCCAATGACTGCTCTGTGCCACCCACTGCACTGCCCCAGTGTCACCCACTGCACTGCCCCACTGCACTGCCCCAGTGCCACCCGCCCCAGTGCCACCCACTGCCCCAGTGCCACCCACTGCACTGCCCAGTGCCACCCACGACCAGCAGGATGACCAGATTAGGCAGCTTAATGCTCTTATGGCATTAGAACAGAGAGCGCCTCACCTCCTCTTCTCCGATTGGCCACCGCCAGGACTCCTGGGGAGGGTTTCGATTTTCATAGGTCTGCTGGTGGAGCCTGAGGATGCAGGGCTGACCACGGGCAGGGACCAGGGGCTTCTGATGTGGAGGGgctggggggagagacaggggttagGTCTGATGTGCAGggcctgggggagagacaggggttagGTCTGATGTGGAGGGGCTagggagagacaggggttagGTCTGATGTGGaggggctgggggag

Function

NR:

description
band 4.1-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2069491 True 489 lncRNA 0.63 2 39703636 39704163

Neighbor

gene id symbol gene type direction distance location
LOC110501860 LOC106582389 coding upstream 137012 39478254 ~ 39566624 (+)
zgc:162780 yh09 coding upstream 248511 39451592 ~ 39455125 (+)
LOC110501853 LOC106582378 coding upstream 829322 38868673 ~ 38875945 (+)
plekhm3 plekhm3 coding upstream 860294 38758854 ~ 38843342 (+)
LOC110501851 LOC106582376 coding upstream 949142 38740986 ~ 38754494 (+)
si:ch73-116o1.2 LOC106582394 coding downstream 186480 39890643 ~ 39912862 (+)
LOC118943662 NA coding downstream 208750 39912913 ~ 39913040 (+)
acmsd acmsd coding downstream 467572 40171735 ~ 40185460 (+)
LOC110501869 ccnt2 coding downstream 486420 40190583 ~ 40200438 (+)
LOC110502148 rab3gap1 coding downstream 511857 40216020 ~ 40263466 (+)
G1808783 NA non-coding upstream 17832 39684953 ~ 39685804 (+)
G1808580 NA non-coding upstream 199547 39503678 ~ 39504089 (+)
G1808521 NA non-coding upstream 302946 39400392 ~ 39400690 (+)
G1808515 NA non-coding upstream 316714 39386601 ~ 39386922 (+)
G1808495 NA non-coding upstream 342396 39360587 ~ 39361240 (+)
G1808828 NA non-coding downstream 57658 39761821 ~ 39762838 (+)
G1808852 NA non-coding downstream 86042 39790205 ~ 39790570 (+)
G1808864 NA non-coding downstream 109800 39813963 ~ 39840326 (+)
G1809082 NA non-coding downstream 193207 39897370 ~ 39898806 (+)
G1808787 NA other upstream 8768 39693913 ~ 39694868 (+)
G1808209 NA other upstream 552303 39149080 ~ 39151333 (+)
G1807566 NA other upstream 840500 38862740 ~ 38863136 (+)
G1807376 NA other upstream 1292473 38406137 ~ 38411163 (+)
G1807306 NA other upstream 1387383 38282124 ~ 38316253 (+)
G1809107 NA other downstream 220251 39924414 ~ 39925395 (+)
G1810553 NA other downstream 1485526 41189689 ~ 41192492 (+)
G1810740 NA other downstream 1760315 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 2552392 42256417 ~ 42389468 (+)
G1812428 NA other downstream 3019509 42723672 ~ 42724114 (+)

Expression


Co-expression Network