G1812137


Basic Information

Item Value
gene id G1812137
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42454598 ~ 42454867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073100
tcattttgtatgcattttgatggagggaaactggatggattattgactgaagcgcgccagctaaactgagtttttatggatatgaAGAAGGAtattattgaacaaaaggaccatttgtgatgtaactgggaccttttggagtgccaacagaagaaggtCATCAAAgataaggcatttattatatcgctatttctgactttcgtgtggcacctgcctggttgaaatatgtttttcatgatTTTGTATGCAGGGCGCAGTCCTCAaataatc

Function

NR:

description
PREDICTED: bromodomain-containing protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073100 True 270 lncRNA 0.39 1 42454598 42454867

Neighbor

gene id symbol gene type direction distance location
LOC110501889 LOC106582433 coding upstream 65130 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 511373 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 926462 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1091472 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 1696372 40745882 ~ 40758226 (+)
LOC110501894 glpc coding downstream 57106 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 160311 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 233348 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 429844 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 758973 43213840 ~ 43226393 (+)
G1812128 NA non-coding upstream 8023 42446247 ~ 42446575 (+)
G1812126 NA non-coding upstream 8900 42445467 ~ 42445698 (+)
G1812123 NA non-coding upstream 13755 42440619 ~ 42440843 (+)
G1811873 NA non-coding upstream 212179 42242082 ~ 42242419 (+)
G1811749 NA non-coding upstream 297631 42156622 ~ 42156967 (+)
G1812138 NA non-coding downstream 220 42455087 ~ 42455344 (+)
G1812141 NA non-coding downstream 1353 42456220 ~ 42456441 (+)
G1812143 NA non-coding downstream 2362 42457229 ~ 42457484 (+)
G1812148 NA non-coding downstream 5954 42460821 ~ 42461065 (+)
G1812150 NA non-coding downstream 6247 42461114 ~ 42461346 (+)
G1810740 NA other upstream 988249 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1262106 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2529203 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2759730 39693913 ~ 39694868 (+)
G1812428 NA other downstream 268805 42723672 ~ 42724114 (+)
G1812953 NA other downstream 694895 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1653377 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1863291 44148629 ~ 44324651 (+)

Expression


Co-expression Network