G1812158


Basic Information

Item Value
gene id G1812158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42465380 ~ 42465699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073121
cacatatgctgagcacttgttggctgcttttccttcactctgcggtccaattcatctcaaaccatctcaattgggttgaggtcgggtgattgttgaggccaggtcatctgatgcagcactccatcactctcattcttggtcaaatagcccttacacagcctggaggtgtgttgggccattgtcctgttgaaaaacaaattatagtcccactaagcgcaaaccagacgggatggcatatcgctgcagaatgctatggtagccatgctggttacgtatgccttgaattctaaataaatcactgacagtgttaccagaaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073121 True 320 lncRNA 0.47 1 42465380 42465699

Neighbor

gene id symbol gene type direction distance location
LOC110501889 LOC106582433 coding upstream 75912 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 522155 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 937244 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1102254 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 1707154 40745882 ~ 40758226 (+)
LOC110501894 glpc coding downstream 46274 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 149479 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 222516 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 419012 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 748141 43213840 ~ 43226393 (+)
G1812150 NA non-coding upstream 4034 42461114 ~ 42461346 (+)
G1812148 NA non-coding upstream 4315 42460821 ~ 42461065 (+)
G1812143 NA non-coding upstream 7896 42457229 ~ 42457484 (+)
G1812141 NA non-coding upstream 8939 42456220 ~ 42456441 (+)
G1812138 NA non-coding upstream 10036 42455087 ~ 42455344 (+)
G1812159 NA non-coding downstream 12430 42478129 ~ 42478437 (+)
G1812167 NA non-coding downstream 13168 42478867 ~ 42479307 (+)
G1812177 NA non-coding downstream 27983 42493682 ~ 42493916 (+)
G1812227 NA non-coding downstream 104310 42570009 ~ 42572303 (+)
G1812228 NA non-coding downstream 107129 42572828 ~ 42573035 (+)
G1810740 NA other upstream 999031 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1272888 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2539985 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2770512 39693913 ~ 39694868 (+)
G1812428 NA other downstream 257973 42723672 ~ 42724114 (+)
G1812953 NA other downstream 684063 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1642545 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1852459 44148629 ~ 44324651 (+)

Expression


Co-expression Network