G1812444


Basic Information

Item Value
gene id G1812444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42785744 ~ 42786135 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073452
ccCAGAGTCTCTAGATCACAAACACGGTTCCTTCCTCAGTACAAACAGGGTCTAAGAATCGGTTGTCTTCTCACAGCTCTGAGAAGGTCGCAGGTTGTCTTCTCACAGCTCTGAGAAGGTCGCAGGTTGTCTTCTCACAGCTCTGAGAAGGTCGCAGGTCTACTTGCTGTATTGAACCACCGGCTCCCGGGTGGGCggagcggtttaaggcactgcatctcagtgctagaggcgtcactgtagacaccctggttcgatgccgggctgtatcacaaccggctgtgatctggagtcccatagggcggcgcacaattggcccagcgtcatccgggttaggggagggtttggccggggtaggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073452 True 360 lncRNA 0.57 2 42785744 42786135

Neighbor

gene id symbol gene type direction distance location
LOC110502157 LOC106582435 coding upstream 51182 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 100636 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 234774 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 396276 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 842519 41941197 ~ 41943225 (+)
LOC110501901 LOC106582440 coding downstream 98576 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 427705 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 444289 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 560668 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 715658 43501793 ~ 43549935 (+)
G1812431 LOC106613263 non-coding upstream 36013 42749279 ~ 42749731 (+)
G1812430 NA non-coding upstream 36482 42748928 ~ 42749262 (+)
G1812411 NA non-coding upstream 46604 42737806 ~ 42739140 (+)
G1812429 NA non-coding upstream 59672 42725820 ~ 42726072 (+)
G1812425 NA non-coding upstream 64316 42720836 ~ 42721428 (+)
G1812456 NA non-coding downstream 12059 42798194 ~ 42802601 (+)
G1812556 NA non-coding downstream 65474 42851609 ~ 42851833 (+)
G1812557 NA non-coding downstream 66326 42852461 ~ 42852681 (+)
G1812658 NA non-coding downstream 188614 42974749 ~ 42974974 (+)
G1812428 NA other upstream 61630 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1319395 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1593252 41189689 ~ 41192492 (+)
G1812953 NA other downstream 363627 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1322109 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1532023 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1576526 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1712322 44498457 ~ 44508051 (+)

Expression


Co-expression Network