G1812707


Basic Information

Item Value
gene id G1812707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42884794 ~ 42885584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073770
TTATATCACAAATGCATTTCCTTCATTAGGCAAAATCAACCACAACTTCATGGATGACAGGCGAGTATACCCTTCATTCAACAGCAACAATACTTTCATatggctgtgcattatcataatAAACAACTATATCcctaaataaaatgtatgtatgtGCTTTGTAGCCTAAAGCCAAGGCGCCGGTTATCAAAATGTCCATTCACGCACTATAGTAGTCAGTGATGTAAATTAGAACATTACAGTTTTGCATAATACAGAATTACATGTGTTCTTCTTATCCACTTGATATGGTTTATTATGCCATGACTATACCCACTTAACGACTGTGTtcaatacatcattatattgaCAGGTAGCACTGACATTTTACATTCCCTTCTTACCTGACGTTTCTTGCAGAGGAACATTTTCAAAGCTGAAGCCTTTTGCGATAGAAGCTTGTCTAACCTCACTGCAGTTATGTGCTTTAAAATCTGCTCCAGTGACAACGGACAGCGCCACAGATAAAGTCCATAGGACGGTCCGTATTCCCAACATCGTGCACTTCCGTGATTAATCCTTCTTTAATCCTCTGCAGATTCCCGTTTGTAGAGGAACTCCCACTGCAGTGCATCCGGACGTAGTAGGTACTAACAACTCAATATCTAATGATTACCACTTTTCTACAACTGTCTATCATAACATCTTTCTCAATCAAAATCTGTTTATTTTTGCCAACGATGGTAGACGGTCCTGCGTTGACGCAAAAACAGATTGTTGTTGTGAGTCCAGGTAAAACCACATGGATCCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073770 True 791 lncRNA 0.39 1 42884794 42885584

Neighbor

gene id symbol gene type direction distance location
LOC110501899 LOC106582439 coding downstream 61182 42801020 ~ 42823612 (-)
LOC110501898 LOC106582438 coding downstream 87302 42770253 ~ 42797492 (-)
LOC110501897 LOC106582436 coding downstream 136217 42740619 ~ 42748577 (-)
LOC110502155 psd12 coding downstream 279026 42603998 ~ 42605768 (-)
LOC110501896 LOC106582434 coding downstream 281345 42592218 ~ 42603449 (-)
LOC110501902 LOC106582441 coding upstream 164820 43050404 ~ 43056474 (-)
LOC110502158 LOC100137092 coding upstream 173965 43059549 ~ 43067135 (-)
LOC110501903 LOC106582442 coding upstream 213748 43099332 ~ 43101649 (-)
LOC110502159 NA coding upstream 268203 43153787 ~ 43159661 (-)
LOC118943590 NA coding upstream 607701 43493285 ~ 43498392 (-)
G1812593 NA non-coding downstream 9210 42874714 ~ 42875584 (-)
G1812591 NA non-coding downstream 10926 42873632 ~ 42873868 (-)
G1812589 NA non-coding downstream 12669 42871851 ~ 42872125 (-)
G1812574 NA non-coding downstream 22453 42862126 ~ 42862341 (-)
G1812565 NA non-coding downstream 26954 42857631 ~ 42857840 (-)
G1812752 NA non-coding upstream 77038 42962622 ~ 42962859 (-)
G1812766 NA non-coding upstream 98787 42984371 ~ 42984662 (-)
G1812770 NA non-coding upstream 104156 42989740 ~ 42989947 (-)
G1812775 NA non-coding upstream 111875 42997459 ~ 42997665 (-)
G1812782 NA non-coding upstream 125601 43011185 ~ 43011419 (-)
G1812404 NA other downstream 207034 42677257 ~ 42677760 (-)
G1812079 LOC106582433 other downstream 495521 42386822 ~ 42389273 (-)
G1811042 NA other downstream 1279563 41604974 ~ 41605231 (-)
LOC110501886 rhg15 other downstream 1419147 41447899 ~ 41523764 (-)
LOC110502171 LOC106582464 other upstream 1624823 44473683 ~ 44553607 (-)
G1814480 NA other upstream 1787863 44673447 ~ 44673888 (-)
G1815615 LOC106582489 other upstream 2953166 45838750 ~ 45840982 (-)
G1816841 NA other upstream 4339967 47225551 ~ 47226646 (-)
G1816929 NA other upstream 4515538 47400985 ~ 47402047 (-)

Expression


Co-expression Network