G1815798


Basic Information

Item Value
gene id G1815798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 46071441 ~ 46072337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077348
cagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtagcagcagtatactgtaggtagggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagtatactgtaggtagggatagataatagacagtaacagcagtatgctgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtata
>TU2077350
cagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtagcagcagtatactgtaggtaggggtaaaggatagataatagacagtagcagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggtaggggtaaaggatagataatagacagtaacagcagtatactgtaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077348 False 422 lncRNA 0.38 2 46071441 46072000
TU2077350 True 306 lncRNA 0.39 2 46071441 46072337

Neighbor

gene id symbol gene type direction distance location
LOC100136162 gbp coding upstream 63263 45981604 ~ 46008178 (+)
LOC110501949 LOC106582502 coding upstream 100316 45954363 ~ 45971125 (+)
ercc1 ercc1 coding upstream 130541 45932805 ~ 45940900 (+)
LOC110501938 LOC106582481 coding upstream 199900 45869308 ~ 45871541 (+)
LOC110501937 LOC106582489 coding upstream 230422 45838735 ~ 45841019 (+)
serpine3 LOC106582496 coding downstream 34957 46107294 ~ 46115457 (+)
LOC110501947 LOC106582498 coding downstream 84875 46157212 ~ 46170323 (+)
LOC110501891 LOC106596153 coding downstream 439300 46511637 ~ 46534272 (+)
dip2a dip2a coding downstream 467141 46539478 ~ 46771502 (+)
LOC118943615 NA coding downstream 697975 46770312 ~ 46771502 (+)
LOC110501948 LOC106582500 non-coding upstream 42539 46028549 ~ 46088009 (+)
G1815783 NA non-coding upstream 56170 46015020 ~ 46015271 (+)
G1815695 NA non-coding upstream 84425 45986629 ~ 45987016 (+)
G1815643 NA non-coding upstream 123396 45946222 ~ 45948045 (+)
G1815657 NA non-coding upstream 127559 45941915 ~ 45943882 (+)
G1815816 NA non-coding downstream 22137 46094474 ~ 46096239 (+)
G1815826 NA non-coding downstream 45916 46118253 ~ 46120092 (+)
G1815850 NA non-coding downstream 100755 46173092 ~ 46173357 (+)
G1815851 NA non-coding downstream 102509 46174846 ~ 46175090 (+)
G1815852 NA non-coding downstream 102829 46175166 ~ 46175370 (+)
G1815137 NA other upstream 288905 45781499 ~ 45782536 (+)
G1815113 LOC106582487 other upstream 345113 45725039 ~ 45726328 (+)
LOC110502177 LOC106582482 other upstream 544001 45521920 ~ 45527893 (+)
LOC110501942 atp5g2 other upstream 895969 45172891 ~ 45175477 (+)
G1814811 NA other upstream 960212 45110547 ~ 45111229 (+)
G1815855 NA other downstream 104270 46176607 ~ 46177757 (+)
G1816074 NA other downstream 262503 46334840 ~ 46335370 (+)
G1816206 LOC106581610 other downstream 680554 46752891 ~ 46770563 (+)
G1816706 NA other downstream 1011923 47084260 ~ 47085389 (+)

Expression


Co-expression Network