G1818399


Basic Information

Item Value
gene id G1818399
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 49144554 ~ 49145531 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2080637
ccaaaatAACGGAggaattttggatataaaaataatctcagTTATGGTCCTATGAACCATGTCAGTTATGGTCCTATGAACCATGTCAGTTATGGTCCTGTGAACCATGTCACTAATGGTCCTGTGGTGAAGCATAACCACTAAGTCTACAGTTAACCACTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAATCTACAGTTAACCACTAGTCTACAGTTAACCAATGGTTATCAGTTAACCTCTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAGTCTACAGTTAACCACTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACagctaaccactagtctacagtTAACCACTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACAGTTAACCAATGGTTATCAGTTAACCTCTAGTCTACagctaaccactagtctacagcTAACCACTAGTCTATAGTTAACCACTAGTCTACAGTTAACCACTAGTCTACAGTTAACCTCTAGTCTACAGTTAACCACTAGTCTACagctaaccactagtctacagctaaccactagtctacagcTAACCACTAGTCTATAGTTAACCACTAGTTTTCAGTTAACCACTAGTCTACAGCTAACCTCTAGTCTACagctaaccactagtctacagctaaccactagtctacagcTAACCACTAGTCTATAGTTAACCACTAGTCTACAGTTAACCACTAGTTATCAGTTAACCACTAGTCTATAGTTAACCACTAGTCT

Function

NR:

description
LOW QUALITY PROTEIN: AP2-associated protein kinase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2080637 True 941 lncRNA 0.39 2 49144554 49145531

Neighbor

gene id symbol gene type direction distance location
LOC118943644 NA coding downstream 179921 48962212 ~ 48964633 (-)
LOC110502188 LOC106582504 coding downstream 498633 48505445 ~ 48645921 (-)
LOC110501956 itgav coding downstream 924512 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 1080101 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 1172423 47897057 ~ 47972131 (-)
LOC118943599 NA coding upstream 324571 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 977357 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 1314563 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 1326216 50471747 ~ 50484670 (-)
cd28 LOC100136275 coding upstream 1349536 50495067 ~ 50496991 (-)
G1818396 NA non-coding downstream 970 49143317 ~ 49143584 (-)
G1818391 NA non-coding downstream 39191 49104823 ~ 49105363 (-)
G1818369 NA non-coding downstream 42132 49046582 ~ 49102422 (-)
G1818326 NA non-coding downstream 123348 49020386 ~ 49021206 (-)
G1818325 NA non-coding downstream 124376 49019943 ~ 49020178 (-)
G1818415 NA non-coding upstream 19039 49164570 ~ 49165171 (-)
G1818422 NA non-coding upstream 30725 49176256 ~ 49176594 (-)
G1818436 NA non-coding upstream 51029 49196560 ~ 49197782 (-)
G1818446 NA non-coding upstream 68143 49213674 ~ 49213886 (-)
G1818448 NA non-coding upstream 68640 49214171 ~ 49214378 (-)
G1818393 NA other downstream 18437 49125514 ~ 49126117 (-)
G1818059 NA other downstream 516708 48627364 ~ 48627846 (-)
G1817968 NA other downstream 674519 48469598 ~ 48470035 (-)
G1817836 NA other downstream 684514 48459026 ~ 48460040 (-)
G1817668 NA other downstream 853058 48268787 ~ 48291496 (-)
G1818417 NA other upstream 20220 49165751 ~ 49166367 (-)
G1818802 NA other upstream 572101 49717632 ~ 49719378 (-)
G1819189 NA other upstream 1063943 50137937 ~ 50219233 (-)
G1819250 NA other upstream 1156270 50301801 ~ 50305038 (-)

Expression


Co-expression Network