XLOC_037595 (myo3b)


Basic Information

Item Value
gene id XLOC_037595
gene name myo3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 3699397 ~ 3866707 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073834
ATGAGGTCTTTCTATGGACTGTATCCCTACAAGTCAAGCATGATTGGTCTCGAGTCGCTGGCGGACCCGTCTTCTGATTGGGACATTGTGGAAACGATTGGAAAAGGAACCTATGGCAAGGTCTACAAAGTCATCAATAAGAAAGATGGAAGTCAAGCCGCCGTGAAAGTTTTGGATCCCATTAATAATCCCAGTCACACTAACAGAGATGTGGACGAGGAAATTGAAGCAGAATACAACATCCTTCGCTCCTTGTCCAACCATCCCAATGTTGTGAAGTTCTTTGGCATGTTCTACAAAGCAGATGAGCTCTCCGGAGGGCAGCTATGGCTTGTTTTGGAGTTGTGTAATGGAGGTTCAGTTACTGACCTGATAAAGGGTTTGCTGATGAGGGGAAAACGTCTCGAGGAGCCCATCATCTCCTACATCCTGTGTGGAGCGCTGCTgGGTCTCCAGCATCTTCACAATAACCGAATCATCCACCGTGATGTGAAGGGCAACAACATCCTCCTCACCACTGACGGTGGAGTCAAACTGGTGGACTTCGGTGTCTCAGCTCAGTTGACAAGTGCCCGTTTGCGCCGAAACACATCAGTGGGAACCCCATTCTGGATGGCTCCTGAGGTGATAGCGTGTGAACAGCAGTATGACTACTCGTATGACGCCCGCTGTGATGTGTGGTCGCTGGGCATCACTGCTATAGAGCTGGCAGACGGAGACCCACCACTGGCAGAGATGCACCCGGTCAAAGCACTCTTCAAAATACCACGGAACCCGTCTCCTACCCTCCGCCATCCTGAGCAATGGTGCAGAAGCTTCAGTCACTTCATTGCACAGTGTTTGATAAAGGATTTTGAGACTCGTCCTTCAGTGACGCATCTACTGGAGCATCCGTTCATCAAACAGGCTCATGGGAAAGACACGTTGCTCAGACAGCAGCTGTCGGTCCTTATACGTGAGCAGCAGGACGTGGGCAGCAGGACCAAGACCAGGCATGAACGAATCAATACTAGGAAAACCCTGATCATCGAGAGCTGCCCGGATGATGATCTTGTTAACCTGGAGCTTTTAGATGAGGAAACGATCATCGCACACCTTCAGAAGCGGTATCAGGATCTGCAGATCTACACGTATGTTGGGGATATTCTGATCGCCCTGAACCCCTTCCAGAACCTCAGCATCTACTCTCCACAGTTTTCCAAGTTATATCATGGGATGAAGCGCTCCACCAACCCTCCACACATCTTTGCCACCGCTGATGCAGCCTATCAGAGCATGGTGACTCTCTGCAAAGACCAGTGTATAATCATCAGTGGAGAAAGTGGAGCCGGTAAAACTGAGAGTGCCCACCTCATTGTCCAGCATCTCACCTTTCTGGGCAAGGCTAACAATCGCACACTCCGCGAGAAGATTCTTCAAGTCAATCCCCTGGTGGAGGCGTTTGGTAACGCATGCACGGCTATTAACGATAACTCCAGCCGCTTCGGAAAGTATCTGGAGATGAAGTTTACTCCTACAGGAGCAGTGATGGGTGCCAAGATCTCAGAGTATCTTCTGGAGAAATCAAGAGTCATCAAACAGGCTACGGGTGAGAAAAACTTCCACATATTCTACTATATCTATGCTGGTCTTTACCATCAAGACAACCTCAGGAAATACAAGCTACCCAACAAAACTGCCCCCAGATACATTGACTGTGTAAATGGAAAAGTAATGCAGGACATCATTTCTAGCAAACTGTACAAGGAGCAGTTTGACGCCATTCAGGACTGTTTTCGAATCATCGGATTTACAGAGGAGgaAGTGAATTCAGTATACAGAATTCTTGCAGCCATTTTAAACACTGGAAATATTGAGTTCGCATCCGCCAGCTCTCAGCATCAGAGCGACAAGAGTGAAGTGCCCAACTCTGAGGCCTTAGATaacgCGGCAGCTCTGCTTAGCATCGGCTCCGAGGAGCTTCAGGAGGCTTTGACCTCCCACTGTGTGGTAACTCGAGGAGAAACCATCATCCGCACCAACACTGTAGACAAGGCCACCGATGTGAGAGACGCCATGTCTAAAGCGCTGTACGGACGCCTCTTCAGCTGGATCGTCAACCGCATTAATGCCCTGCTGCAGCCGGACACTAACATCTGTGCGGCCGAGAGTGGGATGAACGTGGGGATTCTGGACATCTTCGGCTTCGAGAACTTCAAGAAGAACTCGTTTGAGCAGCTGTGCATCAACATCGCTAACGAACAGATCCAGTTCTACTTCAATCAGCACATCTTTGCCTTGGAACAGATAGAGTATCAGAGTGAGGGTGTAGATGTCAGTCTGGTGGAATACGAGGACAACAGGCCCATTCTGGACATGTTTCTTCAGAAGCCCATGGGTTTACTGTCTTTACTGGATGAGGAGAGCCGATTCCCACAGGCCACTGACCAAACTCTTGTCGATAAATTTCAGGATAACCTGAGGAATAAGTACTTCTGGATACCCAAGCGTGTGGAGCTCTGTTTTGGGATCCAGCATTATGCAGGCCAGGTCTTGTATAACGTGAGTGGATTTCTGGAGAAGAATCGTGACACTCTTCCTGCAGACATCGTGGTGGTTTTGAGGACATCGGAGAACAGACTTCTGCAGCAGCTGTTTTCCAGCCCTCTGACAAAAACAGGTAATCTGGCCACATCCAGAGCAAGAGTGACAGCAGCCTCCAGATCTCTGCCTCCGCAACTCAACAGCGGAAGAAATAAGTCTCCTAAATACCTGTTAAAGgtggACACCATGGAAATGATGCGTCACCCTGAAGAAACCACTAACATGAGGAGACAGACAGTGGCGTCTTATTTCAGGTACTCTCTTATGGACTTGCTGTCCAAGATGGTGGTCGGGACACCTCATTTCGTGCGCTGTATCAAACCTAATGACGACCGACAGGCTCTGCGCTTCAATAAAGAGCGTGTGATGGTTCAGCTGCGCTACACCGGCATCCTGGAGACCGTCAACATCCGCAGACAGGGCTATTCCCACCGCATCCTCATCCAGGAGTTCGTAAACAGGTATTACTATCTGGCCTTTCGAGCTCATCAGATGCCAGAGGGAAGTAAAGAGAACGCCATTATTATATTGCAGAAGGCCAAACTAGACTACTGGGTAGTGGGCAACACAAAGGTGTTTCTGAAGTATTATCACGTGGAGCAGCTCAATCTGATGTTGCGGGAAGTGATCGCTCGAGTGGTGTTGATGCAAGCCTACACCAAGGGCTGGCTGGGCGCTCGACGCTaccgcagagagagagagaaacgccGCAATGGGGCAGTCGTCATACAGTCAGCCTGGAGGGGTCACGTGGCTCGTCAGAATCTGAAGCTGATAAAGAGAGAGCGTGAACAGGCCGCTGTGCAGATCCAGTCAGTATACCGAGGCTACAGAGTCAGGAAGGACTACAAACAGATTCTGGGTCTGGTTATTGTGTTTGTTTCCTTTGTATGTTATCATGGTGTGTTTTTGCCTGATTGTGTGTTTAGCTGTCTATACAGTCCCGTAGGCCCAACGCTGAAGCTACACCAGCACCGTTCCCCTCGGCGTAGAGGACAGCAGCCCAAGCTCCTGAACAGCCCGGAAGACAGTCTTTATTACAACCATCTCAACAGAAGTCTGGATTATCAGGGGAGCAAGAGGAAACCCAGAAAACTGGGGCAAATCAAGCTTCTGGACGGAGAGGATGAATATTATCAGTTACTGTCCACAATAGAGGCCGTCCCTGAGGAGGATGTTTTAACTGGCACCTCCCCCAACCCAACGTCAACCCCGCCCACTATCTCTTCCAGATGA
>TCONS_00073835
GAACCCGTCTCCTACCCTCCGCCATCCTGAGCAATGGTGCAGAAGCTTCAGTCACTTCATTGCACAGTGTTTGATAAAGGATTTTGAGACTCGTCCTTCAGTGACGCATCTACTGGAGCATCCGTTCATCAAACAGGCTCATGGGAAAGACACGTTGCTCAGACAGCAGCTGTCGGTCCTTATACGTGAGCAGCAGGACGTGGGCAGCAGGACCAAGACCAGGCATGAACGAATCAATACTAGGAAAACCCTGATCATCGAGAGCTGCCCGGATGATGATCTTGTTAACCTGGAGCTTTTAGATGAGGAAACGATCATCGCACACCTTCAGAAGCGGTATCAGGATCTGCAGATCTACACGTATGTTGGGGATATTCTGATCGCCCTGAACCCCTTCCAGAACCTCAGCATCTACTCTCCACAGTTTTCCAAGTTATATCATGGGATGAAGCGCTCCACCAACCCTCCACACATCTTTGCCACCGCTGATGCAGCCTATCAGAGCATGGTGACTCTCTGCAAAGACCAGTGTATAATCATCAGTGGAGAAAGTGGAGCCGGTAAAACTGAGAGTGCCCACCTCATTGTCCAGCATCTCACCTTTCTGGGCAAGGCTAACAATCGCACACTCCGCGAGAAGATTCTTCAAGTCAATCCCCTGGTGGAGGCGTTTGGTAACGCATGCACGGCTATTAACGATAACTCCAGCCGCTTCGGAAAGTATCTGGAGATGAAGTTTACTCCTACAGGAGCAGTGATGGGTGCCAAGATCTCAGAGTATCTTCTGGAGAAATCAAGAGTCATCAAACAGGCTACGGGTGAGAAAAACTTCCACATATTCTACTATATCTATGCTGGTCTTTACCATCAAGACAACCTCAGGAAATACAAGCTACCCAACAAAACTGCCCCCAGATACATTGACTGTGTAAATGGAAAAGTAATGCAGGACATCATTTCTAGCAAACTGTACAAGGAGCAGTTTGACGCCATTCAGGACTGTTTTCGAATCATCGGATTTACAGAGGAGgaAGTGAATTCAGTATACAGAATTCTTGCAGCCATTTTAAACACTGGAAATATTGAGTTCGCATCCGCCAGCTCTCAGCATCAGAGCGACAAGAGTGAAGTGCCCAACTCTGAGGCCTTAGATaacgCGGCAGCTCTGCTTAGCATCGGCTCCGAGGAGCTTCAGGAGGCTTTGACCTCCCACTGTGTGGTAACTCGAGGAGAAACCATCATCCGCACCAACACTGTAGACAAGGCCACCGATGTGAGAGACGCCATGTCTAAAGCGCTGTACGGACGCCTCTTCAGCTGGATCGTCAACCGCATTAATGCCCTGCTGCAGCCGGACACTAACATCTGTGCGGCCGAGAGTGGGATGAACGTGGGGATTCTGGACATCTTCGGCTTCGAGAACTTCAAGAAGAACTCGTTTGAGCAGCTGTGCATCAACATCGCTAACGAACAGATCCAGTTCTACTTCAATCAGCACATCTTTGCCTTGGAACAGATAGAGTATCAGAGTGAGGGTGTAGATGTCAGTCTGGTGGAATACGAGGACAACAGGCCCATTCTGGACATGTTTCTTCAGAAGCCCATGGGTTTACTGTCTTTACTGGATGAGGAGAGCCGATTCCCACAGGCCACTGACCAAACTCTTGTCGATAAATTTCAGGATAACCTGAGGAATAAGTACTTCTGGATACCCAAGCGTGTGGAGCTCTGTTTTGGGATCCAGCATTATGCAGGCCAGGTCTTGTATAACGTGAGTGGATTTCTGGAGAAGAATCGTGACACTCTTCCTGCAGACATCGTGGTGGTTTTGAGGACATCGGAGAACAGACTTCTGCAGCAGCTGTTTTCCAGCCCTCTGACAAAAACAGGTAATCTGGCCACATCCAGAGCAAGAGTGACAGCAGCCTCCAGATCTCTGCCTCCGCAACTCAACAGCGGAAGAAATAAGgtggACACCATGGAAATGATGCGTCACCCTGAAGAAACCACTAACATGAGGAGACAGACAGTGGCGTCTTATTTCAGGTACTCTCTTATGGACTTGCTGTCCAAGATGGTGGTCGGGACACCTCATTTCGTGCGCTGTATCAAACCTAATGACGACCGACAGGCTCTGCGCTTCAATAAAGAGCGTGTGATGGTTCAGCTGCGCTACACCGGCATCCTGGAGACCGTCAACATCCGCAGACAGGGCTATTCCCACCGCATCCTCATCCAGGAGTTCGTAAACAGGTATTACTATCTGGCCTTTCGAGCTCATCAGATGCCAGAGGGAAGTAAAGAGAACGCCATTATTATATTGCAGAAGGCCAAACTAGACTACTGGGTAGTGGGCAACACAAAGGTGTTTCTGAAGTATTATCACGTGGAGCAGCTCAATCTGATGTTGCGGGAAGTGATCGCTCGAGTGGTGTTGATGCAAGCCTACACCAAGGGCTGGCTGGGCGCTCGACGCTaccgcagagagagagagaaacgccGCAATGGGGCAGTCGTCATACAGTCAGCCTGGAGGGGTCACGTGGCTCGTCAGAATCTGAAGCTGATAAAGAGAGAGCGTGAACAGGCCGCTGTGCAGATCCAGTCAGTATACCGAGGCTACAGAGTCAGGAAGGACTACAAACAGAGTCGACAATGGACTGG

Function

symbol description
myo3b Predicted to enable several functions, including ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within protein phosphorylation and visual perception. Predicted to be part of myosin complex. Orthologous to human MYO3B (myosin IIIB).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070706-2 Predicted to enable several functions, including ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within protein phosphorylation and visual perception. Predicted to be part of myosin complex. Orthologous to human MYO3B (myosin IIIB).

Ensembl:

ensembl_id ENSDARG00000006892

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073834 False 3819 mRNA 0.50 35 3699397 3866707
TCONS_00073835 True 2664 mRNA 0.50 22 3749800 3834686

Neighbor

gene id symbol gene type direction distance location
XLOC_037594 sp5a coding downstream 27486 3666401 ~ 3671911 (-)
XLOC_037593 gad1a coding downstream 46126 3621968 ~ 3653271 (-)
XLOC_037592 dcaf17 coding downstream 179680 3498377 ~ 3519717 (-)
XLOC_037591 cybrd1 coding downstream 202818 3490824 ~ 3496579 (-)
XLOC_037590 dlx2a coding downstream 298668 3397407 ~ 3400729 (-)
XLOC_037596 ubr3 coding upstream 31425 3898132 ~ 4018452 (-)
XLOC_037597 mylka coding upstream 157543 4024250 ~ 4075620 (-)
XLOC_037598 FP102171.1 coding upstream 577211 4443918 ~ 4447104 (-)
XLOC_037599 kcnj3a coding upstream 611492 4478199 ~ 4511613 (-)
XLOC_037600 galnt13 coding upstream 671820 4538527 ~ 4606463 (-)
XLOC_037589 NA non-coding downstream 303876 3358397 ~ 3395521 (-)
XLOC_037588 NA non-coding downstream 418946 3265568 ~ 3280451 (-)
XLOC_037587 FP236594.1 non-coding downstream 545111 3153726 ~ 3154286 (-)
XLOC_037585 NA non-coding downstream 567229 3130688 ~ 3132168 (-)
XLOC_037581 NA non-coding downstream 832943 2861221 ~ 2866454 (-)
XLOC_037602 NA non-coding upstream 999393 4866100 ~ 4867439 (-)
XLOC_037613 FQ377643.1 non-coding upstream 2542450 6409157 ~ 6409271 (-)
XLOC_037614 NA non-coding upstream 2664842 6531549 ~ 6548796 (-)
XLOC_037618 BX842683.1 non-coding upstream 2850970 6717677 ~ 6717801 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000348_00188221_00233097 MYO3B coding CI01000348 null 188221 ~ 233097 (-)