XLOC_037689


Basic Information

Item Value
gene id XLOC_037689
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 12945557 ~ 12948957 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075308
TCTCTTGTGCTCCTGATGTCCCAGTCTCTCCTTATAGTAAATCAGCATGGCTTCAGTCTTCTCCAGTGCTATCCTGACCCGATCCCTGTCCTTGCTCATCTCCTCAGCTCGCTCCTTTAATGCATATACTTCAACATCCTTCTCTCTGAGGAGTCTGTCCCTCTCCTCCTTTTCTAAAAGGATAGTGGACACTTGCTGCTTTTCCCTATCCCAGTCCTCATTCTCTGTTGGCCCAGTTTTCATGTTCCCATTTTTTAATAGAGAGTGCAGTCGGTCGATTTCAGTCTGTAGTGTTTCAGCCTTGATCCTCAACCTTCGTATTTCCTGATCTTTTTTTGTCAGGTCCTTTCTAAGTGTGTCTGCTTCTAACAGCTTGACATGAGAACGATATTCAGCATTTATCTCTAGGGAGTCTGCAAGAGTACCATGCCCACTATCCATCTTTagaccattgtttttcttttcagaGTCTCTAAAATAGCGTATATCATTTTCCATCTTGGTCTTCATCTCTTGTTTCACTTTCTCTAGGGTTTCtaatttttccctcaatttcttgGTAACTCTTTTCTCATCTTCGAATTGATCCTGCAATCTAAGTCTTGCTGATTGTTCTTTGTACGCCTTTTCTCGAATACTCTCTAACTCAGTTTCCTTATCCCTGAGTCTTTCTGAAACTAATTCAATTTGTCTTACATTCTGTTCATCCCCTTGCTGAAATCTCTCGCTTCTTCTTTTCTCATTTTCATATTTCTCTTTAACCAATTTCATCTCCTTTTCCTTTTCCATCAGAGTTTTTCTAAGGAGCTCCAATTCCTCCAaggcattttgtttttctttgttttctcttTTGAGTTCCTCCCAGTTGTTCTTCTCTCTTATTCTGTCCTCTCTCAGCCTGTCAGCTTCCAGCCTCAGATCTCTGAATCTGTTGCTCAGTTCCTCTGCATCTTTGGTCCTCTCTGCTGCCAAAGAGCTCAGTTCAGTCCTCTGATCTTCCAGAATGTCCAATCTAGCCTTTGCTCTGGTCAGCTCAGCCTCTCTGTGCTCCTTTACGCTTTTCATAGCCATCAATTCTCCTTCCAACTTTTCCTGTCTTTGCTGCAATTGTTCCTTCTCCTGCATCCCTTCCTCATTCTTCTTCTTAAGTTGCTCCACTTGTAGTTGAAGAGTGGTTTCAAGCTCCTGTTTCTGCTTCTCTAACATCTGGACTTTTAGTTGAAGATCTTTGGCTTCAATATGTGCCACCTTAATGCCTTCTTCTCTACTTCGTACCAGCTCATCCTTCCTTTCCTGCATCATGGACCTTAGTCTCTCTCCTTCACGATGACTCTCTTCTAGCAGTTCCTTCAAAGTTGCCATCTCCTGAAGCCCAGCAACTAGCCCCTCTCGCATCTCCTTGTTCTGCTCTTTTTGCTCCTGGATCTTTAACTTGGTTTGCTCTTTAGATCTAGACAGACTAACCAGTTGTTCTTGCAAAGAATCGACCTGGACAGACAGTGATTCCTTTCTTTCCTTGGCATCACTCAATAAAGAGCTTATTCTGTCCTTCTCTCGTCTCTCTCGAAGAGTTTCATCTCTCAAAACCTCCATCTCTCGCTCTTTCCGTCGAAGCTCTGCCGAGAGATGATCTCTCTGCTCCTCCAGTTCTCTTACACGAGACCCAAGCTTCTCCGCACGTCCCATCTTCTCCTCAAACAGGATTTGTTGATCTTTCTGAAAATCCTCAAGCCTGGCTCTTAGTCTTTCCCTATCAATTTTTTCATCTGTCAGTTGGGTCTCCAGGCATCTCTTCTCTTCTTCAATCTGAGTCAATGACCTCTTCAATTGTTGTTTTTCCTCTTCGAGGTTCTCTGTCCTGGATTCAAGCATTTGAGTCTCCACTTGGCTGTTCTGCAGAAGGTGTGATAACTTTCTCTCATCTTCTaccattttatttagtttctcCTTCAGTTTTGTTACTTCTGTAGCTTGATCCTCAAGCCTGGCTTTCAGTCTTTCCCTGTCAATTTTTTCATCTGTCAGTTGGGTCTCCAAAAGCCTCTTCTCTTCTTCAACCTGACTCAAAACCCTCTTTAATTGTTGCTTTTCCTCTATGGTGTTCTCTGCCCTGGATTCAAGCATTTGCGCCTCCACTCGGCTATTCTGCAGTAGTTGTGACAACTTTCTCTCCTCTTCTAAAATCTTATTCAGTTTAGTCACTTCTGTGGCCTGATCCTCAAGCCTGACTCTTAGTCTTTCCTTGTCCACTTTTTCATCTGTCAGTTGGGTCTCCAAATGCCTCTTCTCTTCTTCAATCTGACTCAAAGACCTCTTCAACTGTTGTTTTTCCTCTTCAATGTTCTCTGCCCTGGATTCAAGCACTTGTACCTCCACTCGCTGGTTCTGCAACAGTTTTGACAACCTTCCCTCCTCCTCCAGTCGTTCATCCAGTTTTCCCCTCAGAGTCTTCACTTCTTTGCCTTGTTCACCTATAAGTTTATTTAGTTCTTCAATGCTCTCCTTCTCTTGATCTCGCTCACGTTTGATCAAGAATAGCTCTTCATTACACTCCATAAGTCTTTCTTCTTTTCCTCTGAGCTGATATCTTTCCTTCTCAAGCGTTGTTTCGATTTCTTGTAAACTGCTTAAAACTTTAATGTTCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075308 True 2645 lncRNA 0.43 2 12945557 12948957

Neighbor

gene id symbol gene type direction distance location
XLOC_037688 NA coding downstream 42544 12889898 ~ 12903013 (-)
XLOC_037687 ankzf1 coding downstream 57400 12834414 ~ 12888157 (-)
XLOC_037686 myo10l3 coding downstream 133621 12664373 ~ 12811936 (-)
XLOC_037685 pttg1ipb coding downstream 286417 12655278 ~ 12659140 (-)
XLOC_037684 sumo3b coding downstream 292573 12648705 ~ 12652984 (-)
XLOC_037690 NA coding upstream 5610 12954567 ~ 12956248 (-)
XLOC_037691 NA coding upstream 148264 13097221 ~ 13120257 (-)
XLOC_037692 NA coding upstream 297067 13246024 ~ 13246524 (-)
XLOC_037693 CR407547.2 coding upstream 367962 13316919 ~ 13343167 (-)
XLOC_037694 fzd7a coding upstream 403351 13352308 ~ 13355071 (-)
XLOC_037677 NA non-coding downstream 773772 12076843 ~ 12171785 (-)
XLOC_037675 NA non-coding downstream 1090252 11822379 ~ 11855305 (-)
XLOC_037673 NA non-coding downstream 1290526 11595987 ~ 11655031 (-)
XLOC_037671 NA non-coding downstream 1373203 11571312 ~ 11572354 (-)
XLOC_037695 NA non-coding upstream 826439 13775396 ~ 13810187 (-)

Expression


Co-expression Network