Gene
RNA
| Item | Value |
|---|---|
| gene id | G1977344 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 35143051 ~ 35143330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2260395 | True | 280 | lncRNA | 0.42 | 1 | 35143051 | 35143330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100305155 | LOC106611282 | coding | upstream | 42064 | 35088694 ~ 35100987 (+) |
| LOC110505830 | LOC106611281 | coding | upstream | 86107 | 35012695 ~ 35056944 (+) |
| LOC110505824 | snap23 | coding | upstream | 372031 | 34750884 ~ 34771020 (+) |
| tmem121aa | LOC106602575 | coding | upstream | 457312 | 34681732 ~ 34685739 (+) |
| tedc1 | LOC106611146 | coding | upstream | 665904 | 34457515 ~ 34477147 (+) |
| LOC110505832 | mta1 | coding | downstream | 23818 | 35167148 ~ 35240181 (+) |
| LOC110505833 | LOC106611286 | coding | downstream | 105989 | 35249319 ~ 35289164 (+) |
| LOC110504234 | LOC106602716 | coding | downstream | 396467 | 35539797 ~ 35611701 (+) |
| LOC110504235 | LOC106611305 | coding | downstream | 721240 | 35864570 ~ 35866787 (+) |
| LOC110505837 | LOC106611304 | coding | downstream | 733113 | 35876443 ~ 35880427 (+) |
| G1977328 | LOC106611283 | non-coding | upstream | 1393 | 35120872 ~ 35141658 (+) |
| G1977340 | NA | non-coding | upstream | 7162 | 35134808 ~ 35135889 (+) |
| G1977330 | NA | non-coding | upstream | 19100 | 35122730 ~ 35123951 (+) |
| G1977329 | LOC106611283 | non-coding | upstream | 22932 | 35118401 ~ 35120119 (+) |
| G1977326 | NA | non-coding | upstream | 28373 | 35114325 ~ 35114678 (+) |
| G1977480 | NA | non-coding | downstream | 87421 | 35230751 ~ 35231046 (+) |
| G1977485 | NA | non-coding | downstream | 98874 | 35242204 ~ 35242478 (+) |
| G1977514 | NA | non-coding | downstream | 126866 | 35270196 ~ 35275138 (+) |
| G1977620 | NA | non-coding | downstream | 159263 | 35302593 ~ 35302797 (+) |
| G1976689 | NA | other | upstream | 411740 | 34730027 ~ 34731311 (+) |
| G1976680 | NA | other | upstream | 439157 | 34701980 ~ 34703894 (+) |
| G1976575 | NA | other | upstream | 661130 | 34481519 ~ 34481921 (+) |
| G1976574 | LOC100194703 | other | upstream | 661772 | 34480904 ~ 34481279 (+) |
| G1976573 | LOC100194703 | other | upstream | 662154 | 34480030 ~ 34480897 (+) |
| G1978080 | NA | other | downstream | 883203 | 36026533 ~ 36027737 (+) |
| LOC110505847 | LOC106611313 | other | downstream | 1245941 | 36376220 ~ 36824709 (+) |
| LOC110504241 | dnah14 | other | downstream | 2074931 | 37161387 ~ 37222396 (+) |
| hivep2b | LOC106611354 | other | downstream | 2121450 | 37264780 ~ 37311200 (+) |
| G1980026 | NA | other | downstream | 2577804 | 37721134 ~ 37729904 (+) |
