Gene
RNA
| Item | Value |
|---|---|
| gene id | G1983420 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 41312438 ~ 41312669 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2267553 | True | 232 | lncRNA | 0.41 | 1 | 41312438 | 41312669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-132f19.7 | LOC106611404 | coding | upstream | 421326 | 40868101 ~ 40891112 (+) |
| dnajc27 | LOC106611405 | coding | upstream | 452384 | 40829046 ~ 40860054 (+) |
| pomca | LOC100510783 | coding | upstream | 489612 | 40819696 ~ 40822826 (+) |
| snx9a | LOC105031565 | coding | upstream | 570699 | 40689188 ~ 40741739 (+) |
| LOC118944272 | NA | coding | upstream | 732780 | 40578668 ~ 40579658 (+) |
| LOC110505965 | trim9 | coding | downstream | 234702 | 41547371 ~ 41622795 (+) |
| LOC110505964 | LOC106611459 | coding | downstream | 323487 | 41636156 ~ 41666062 (+) |
| LOC110505960 | LOC106611458 | coding | downstream | 364675 | 41677344 ~ 41737128 (+) |
| LOC110505959 | LOC106611457 | coding | downstream | 427504 | 41740173 ~ 41757394 (+) |
| LOC110504274 | LOC106611444 | coding | downstream | 468602 | 41781271 ~ 41937779 (+) |
| G1983404 | NA | non-coding | upstream | 53642 | 41258504 ~ 41258796 (+) |
| G1983391 | NA | non-coding | upstream | 67162 | 41220680 ~ 41245276 (+) |
| G1983395 | NA | non-coding | upstream | 75448 | 41236632 ~ 41236990 (+) |
| G1983361 | NA | non-coding | upstream | 113596 | 41191975 ~ 41198842 (+) |
| G1983324 | NA | non-coding | upstream | 175712 | 41114402 ~ 41136726 (+) |
| G1983422 | NA | non-coding | downstream | 13780 | 41326449 ~ 41330431 (+) |
| G1983459 | NA | non-coding | downstream | 39358 | 41352027 ~ 41352336 (+) |
| G1983462 | NA | non-coding | downstream | 42410 | 41355079 ~ 41355421 (+) |
| G1983463 | NA | non-coding | downstream | 43154 | 41355823 ~ 41356031 (+) |
| G1983468 | NA | non-coding | downstream | 44754 | 41357423 ~ 41359264 (+) |
| G1983387 | NA | other | upstream | 95686 | 41215475 ~ 41216752 (+) |
| G1983277 | NA | other | upstream | 264536 | 41047551 ~ 41047902 (+) |
| G1982355 | NA | other | upstream | 922031 | 40389658 ~ 40390407 (+) |
| LOC110505902 | LOC106611388 | other | upstream | 1758946 | 39543907 ~ 39557667 (+) |
| G1981068 | NA | other | upstream | 2217624 | 39036366 ~ 39094814 (+) |
| G1983499 | NA | other | downstream | 135733 | 41448402 ~ 41449340 (+) |
| G1983721 | NA | other | downstream | 750356 | 42063025 ~ 42103896 (+) |
| G1983777 | NA | other | downstream | 919571 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 949558 | 42262227 ~ 42262714 (+) |
