G1983404


Basic Information

Item Value
gene id G1983404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41258504 ~ 41258796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267535
gtataataaacatgatgtctgtagtatagtataataaacatgatgtctgtagtatagtataataaacatgatgtctgtagtatagtattataaacatgatgtctgtagtatagtataatacacatgatgtctgtagtatagtataataaacatgatgtctgtagtatagtataataaacatgatgtctgtagtatagtataatgaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267535 True 209 lncRNA 0.25 2 41258504 41258796

Neighbor

gene id symbol gene type direction distance location
si:ch211-132f19.7 LOC106611404 coding upstream 367392 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 398450 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 435678 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 516765 40689188 ~ 40741739 (+)
LOC118944272 NA coding upstream 678846 40578668 ~ 40579658 (+)
LOC110504259 LOC106603281 coding downstream 38636 41297432 ~ 41350749 (+)
LOC110505965 trim9 coding downstream 288575 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 377360 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 418548 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 481377 41740173 ~ 41757394 (+)
G1983391 NA non-coding upstream 13228 41220680 ~ 41245276 (+)
G1983395 NA non-coding upstream 21514 41236632 ~ 41236990 (+)
G1983361 NA non-coding upstream 59662 41191975 ~ 41198842 (+)
G1983324 NA non-coding upstream 121778 41114402 ~ 41136726 (+)
G1983320 NA non-coding upstream 148693 41109527 ~ 41109811 (+)
G1983420 NA non-coding downstream 53642 41312438 ~ 41312669 (+)
G1983422 NA non-coding downstream 67653 41326449 ~ 41330431 (+)
G1983459 NA non-coding downstream 93231 41352027 ~ 41352336 (+)
G1983462 NA non-coding downstream 96283 41355079 ~ 41355421 (+)
G1983463 NA non-coding downstream 97027 41355823 ~ 41356031 (+)
G1983387 NA other upstream 41752 41215475 ~ 41216752 (+)
G1983277 NA other upstream 210602 41047551 ~ 41047902 (+)
G1982355 NA other upstream 868097 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1705012 39543907 ~ 39557667 (+)
G1981068 NA other upstream 2163690 39036366 ~ 39094814 (+)
G1983499 NA other downstream 189606 41448402 ~ 41449340 (+)
G1983721 NA other downstream 804229 42063025 ~ 42103896 (+)
G1983777 NA other downstream 973444 42232240 ~ 42232904 (+)

Expression


Co-expression Network