G2029088


Basic Information

Item Value
gene id G2029088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 39438102 ~ 39510522 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2320699
atacatttggttccagttagaactcttttgggttccatgtagaaaagggttctatctggaggtaaaaagggttatcctatggagatagcccgaagaacccttttaaaaCTAAAAGAAtgtaccatgattacggataattaTGAAGGAATTGTGAATCATGATGAGTGAAAAAGCATAAATATCCCGAAAAATGCTTACCTCCCCtggtattggtaatggtgagaggtagcatgttttgggggcataatctgtgtgcatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgagtatgtgtagctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagctgagtATGTGTagctgagtgtttgtgtgtgcgcgtgcgcgtgcgtgtgtgttctcACCCCAAAGTTGGATGCAGCGAAGCGGTCGGAGGCAGAGATGTTGGTTGAGACGGTGGTGGTGTGGGCAAAGTAGGCGTTGATGTTGGCTAGCAGGTTACTCATCACCGCTGGGACCCCCGGACACATGTACttagaggacagacaggagaaatgcctgggggagagagagaggggtagcggagagagagagggtgatgtggaaagggagagggaggagtggaaagggagaaaagggggagagagagaggggtagcggagagagagagggtgatgtggaaagggagagggaggagtggaaagggagaaaagggggagagagagaggggtagcggagagagagagggtgatgtggaaagggagagggaggagtggaaagggagaaaagggggagagagagaggggtagcagagagagag

Function

NR:

description
protein unc-13 homolog C-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2320699 True 888 lncRNA 0.50 3 39438102 39510522

Neighbor

gene id symbol gene type direction distance location
LOC110506772 LOC106562440 coding downstream 171890 39257054 ~ 39266212 (-)
LOC110506771 LOC106562441 coding downstream 184256 39243039 ~ 39253846 (-)
LOC118944513 NA coding downstream 196289 39236314 ~ 39241813 (-)
LOC110506770 NA coding downstream 213548 39182572 ~ 39224554 (-)
LOC110506758 LOC106587719 coding downstream 335677 39084335 ~ 39102425 (-)
LOC118944392 NA coding upstream 297395 39807917 ~ 39808763 (-)
LOC110516672 NA coding upstream 528874 40039396 ~ 40043697 (-)
LOC110513022 LOC106587669 coding upstream 533571 40044093 ~ 40136691 (-)
LOC110526651 LOC106562502 coding upstream 628349 40138871 ~ 40150776 (-)
pldn pldn coding upstream 686612 40197134 ~ 40200916 (-)
G2028806 NA non-coding downstream 153560 39284249 ~ 39284542 (-)
G2028801 NA non-coding downstream 157677 39279676 ~ 39280425 (-)
G2028795 NA non-coding downstream 162903 39274720 ~ 39275199 (-)
G2028789 NA non-coding downstream 169277 39268622 ~ 39268825 (-)
G2028736 NA non-coding downstream 183795 39253935 ~ 39254307 (-)
G2029140 NA non-coding upstream 17414 39527936 ~ 39530347 (-)
G2029145 NA non-coding upstream 32832 39543354 ~ 39545752 (-)
G2029148 LOC106587638 non-coding upstream 45708 39556230 ~ 39568001 (-)
G2029164 NA non-coding upstream 70122 39580644 ~ 39582919 (-)
G2029167 NA non-coding upstream 82305 39592827 ~ 39593752 (-)
G2028779 NA other downstream 207292 39229129 ~ 39233948 (-)
G2028777 LOC106587714 other downstream 211043 39226363 ~ 39227059 (-)
LOC110506757 LOC106562446 other downstream 933967 38411123 ~ 38504156 (-)
LOC110506753 LOC106587607 other downstream 1089746 38334242 ~ 38373760 (-)
G2027052 NA other downstream 1946686 37490852 ~ 37491416 (-)
LOC110506132 LOC106562499 other upstream 756727 40213044 ~ 40269852 (-)
G2029844 NA other upstream 997224 40507746 ~ 40508282 (-)
G2029858 fbn1 other upstream 1040657 40551179 ~ 40567512 (-)
G2030106 NA other upstream 1265192 40775714 ~ 40778988 (-)

Expression


Co-expression Network