G2030106


Basic Information

Item Value
gene id G2030106
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40775714 ~ 40778988 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2321988
TCAttttctcctctatccctctctcccactattttctctctctcctctctctctcttgccaccTGCTGCTCAGTCATACCCCAGGCAGAAAGAGGCTAGTGTTGGTATCGTATGAGAGCAGTCCTCATTCCTCACAGACCTCTGTCTTTTCTCCTTTCTGTTATCATGTGTTGTCAGTCTACATCACCTCCTTTTGTGATGAGATTACACCATCTGGCCAGCTGCTACTCACAACAAGCAACAGCATGCAGGCTTCTCCCCGTCTGGGCGTGTGTTGACCATGTGAAGCTAGCTTCCTGCTATGAGCGTGTGTTCaccagggtcatattcattagtgtACACTGTAGCaaaatggaaaacaaaaacaagcgtttctcattggacaagtccaggtagtcccccctgtttcagtccgttttcttcAGTTTGGTGCTAGTGAACACCACCCATGTGTAGCCTCCACTATAACCACTCCCCGACTGCTATGagtgacagtgaaatgcttctcaACTCCTTGATCCTGTCGGAGCAGAAGGCAGCATTTGCCTTCATAGGGATGTTGCTGCTGGTCCTGGGCCTGCTCATAGTCCGGTGTTTCAGGATCCTTCTGGACCCCTACAGTAGCATGCCCTCCTCCAACTGGTCTGATGGGATAGAGGGCCTGGAGAAAGGGACATTTGAATATGCACTGACCTAACACAGAAGGATACACACATCACATACATTGATTGCAGAGGCACGTATGCACgtacacaagcatgcacacaggAACGAGTATGcattcatgcacacacacgcagaaaacacacacacaccacagacacattAGATCCCAGCCAGCCCCTGAAAACTGGAATGAATTAACTTAAGATGAAGCTGTTTCTGTGAGCTTTTACTGAAACTCTGTCCAGCTCATTGTCTTAGGTAGGCTTTGCTTTCGTCGTCCGAGGGACTACAGCGTCACGTAGGACTGACGCCACCTGTGGAAAGACAATGCGTTCCACATGGGTAACATGTGAGTTGGTATTGAGCCTGgttagagagaacagagaaccaTGCCTGTGGCAAGATGGAGGTCTCAGGGAAAACCACACATCTAGTGATTAATTTGGAGAAAGGTGAGAACGGACTAATTCTGATCCTGATTCAGACAGGAGtaacatggaggagaggatcccATCTTTCACATGGCTCTACTCTACACAACACAGCAATGTACGGATGGAAACAGGGTAATACAAGAATACCATACCAGAGCTAATCAACCATCAAAGTGCTGTTTGCCTGTCATCCTAATGGATTGTTGTGTAGTTCATTTAGGACGGTCCTATAGAACAAGATTGTTATATTATAGTAAGACTGATATTGACTGACCAACATTGTTCTCAGTTTCAAACAGATGATGTTAATAATGTTGATGATGgcgaagatgaggaggagaagaaggatgatgataatgatgatgatattttttttatttaacctttatttaactaggcaagtcagttaagaacaaatccttatttacaatgatggcctacttgggccaaacccggacgacgctgggccaattatgtgccgcgctatgggactcccaatcacggccggatgtgatacagcctggatgatgatgatggggatgataacattgatgatgatggtggtgatgataataatgatgatgataacatTGACGATGATAATGACTAGTGCATTACATGTGTGTCATGTTCTTTTGTAAACCTACTGATCTGGCAGAGAGATACTATCTCTGAACTGTgatttatctggacatggtgtaCAGAACTGTTTCTAATCAATGCAGCAATGGTCTTCAGAGtgagtactgtatgtatgtagtgttgatgagataagagaagagaagagaagaggctgTCATCTCGGAGACAAAGGTTTTTAACGTTGGGAGAGTCTTGTCACTGGCTGTCTCCTGAGGGAAAGGTTACTGGGATAATGATGGTGGAGGAGTCCACACTGCACACACCTCACCCTTCTTCACACCTCCTACCCTGCACAGTCTCATCCCCTCCTCACCCATCCTCCCCTGCACATgagtccctctctcacccctcctctcTGGCACAAGActacctctctcacccctcctcatgCTTCttaccccctccttcctctcctttatctactcacccttcctcctcctcacacaTACTCACTCCTCCACACCATCCTCCTCACTCTTCCTCACTCCTCCTAACCctaggaatggaggagagagccCTCACCCAGACAGAAACAGAATGTTCATCTCAGTGCTGTGAATCTGCCTTACTGTGACCTATGGGTTTACGTGCCTTTGTTTAGAAATAtttgcccgtgtgtgtgtgtgcacatgcttgtgtgtgtatctgtgtgtgcacgcacgtgtgtgtgtgatcatgcttgtatgtgtgcgtgcgtatgtcaTGATGACTGATGACGGTGTATCTACTCCACTGTTGCTCAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2321988 True 2486 TUCP 0.46 3 40775714 40778988

Neighbor

gene id symbol gene type direction distance location
LOC110506139 slc12a1 coding downstream 39488 40680421 ~ 40736226 (-)
dut dut coding downstream 107872 40663518 ~ 40667842 (-)
LOC110519217 LOC106587666 coding downstream 409767 40335544 ~ 40365947 (-)
LOC110506134 LOC106587633 coding downstream 467803 40296124 ~ 40307911 (-)
LOC110506132 LOC106562499 coding downstream 505862 40213044 ~ 40269852 (-)
LOC110519157 slc24a5 coding upstream 25115 40804103 ~ 40832292 (-)
LOC118944423 NA coding upstream 92444 40871432 ~ 40873618 (-)
LOC110519559 LOC106562535 coding upstream 159042 40938030 ~ 40983650 (-)
LOC110506810 LOC106562534 coding upstream 652274 41431262 ~ 41439598 (-)
LOC110515873 LOC106562546 coding upstream 683728 41461857 ~ 41567947 (-)
G2029934 NA non-coding downstream 11102 40764369 ~ 40764612 (-)
G2029919 NA non-coding downstream 61591 40711330 ~ 40714123 (-)
G2029918 NA non-coding downstream 65932 40709459 ~ 40709782 (-)
G2029908 NA non-coding downstream 102140 40672703 ~ 40673574 (-)
G2029907 NA non-coding downstream 104034 40671267 ~ 40671680 (-)
G2030117 NA non-coding upstream 21920 40800908 ~ 40827265 (-)
G2030131 NA non-coding upstream 65762 40844750 ~ 40845691 (-)
G2030140 NA non-coding upstream 85251 40864239 ~ 40864519 (-)
G2030145 NA non-coding upstream 89984 40868972 ~ 40869245 (-)
G2030147 NA non-coding upstream 93199 40872187 ~ 40872582 (-)
G2029858 fbn1 other downstream 208202 40551179 ~ 40567512 (-)
G2029844 NA other downstream 267432 40507746 ~ 40508282 (-)
pldn pldn other downstream 574899 40197134 ~ 40200916 (-)
G2028779 NA other downstream 1544904 39229129 ~ 39233948 (-)
G2030157 NA other upstream 108615 40887603 ~ 40888684 (-)
G2030162 NA other upstream 119482 40898470 ~ 40899021 (-)
G2030156 NA other upstream 127635 40906623 ~ 40907193 (-)
G2030291 NA other upstream 432489 41211477 ~ 41211852 (-)

Expression


Co-expression Network