LOC118944423


Basic Information

Item Value
gene id LOC118944423
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40871432 ~ 40873618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036963625.1
aTGGCAGATGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCTAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCCAAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAATCCCAAAACAACACCCCAGAACCCAGAAACACCACCCCAGAACCCAGAAACAACACCCCAGAACCCCAAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACACCACCCCAGAATCCCAAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACCCCAAAATAACACCCCAGAACCCAGAAACAACACCCCTGAACCCAGAAACAACACCCCAGAATCCCAAAACAACACCCCAGAACCCAGAAACAACACCCCAGAACAGAGAAACAGAACCCAGAAACAACAGAAAACTAAAAGAGGGGAGGCCTTCAtttactga
>TU2322035
actagcagaaggtcagtgtgtgtgaataggttcactactgccagatggtcagtgtgtgaataggtttacaACTGACAGATGggcagtgtgtgaataggttcactactgacagatgatcagtgtgtgtgaataggtttactactagcagaaggtcagtgtgtgtgaataggttcactactgccagatggtcagtgtgtgaataggtttacaACTGACAGATGggcagtgtgtgaataggttcactactgacagatggtcagtgtgtgaataggttcactactgacagatggtcagtgtgtgtgaataggttcactactgacagatggtcagtgtgtgtgaataggtttactactagcagaaggtcagtgtgtgtgaataggttcactactgccagatggtcagtgtgtgaataggtttacaACTGACAGATGggcagtgtgtgaataggttcactactgacagacgatcagtgtgtgtgaataggttcactactgacagatggtcagtgtgtgaataggttcactactgacagatggtcagtgtgtgtgaataggttcactatggcagatggtcagtgtgtgtgaataggtttactaCTGGCAGAAGGTCAGcgtgtgtgaataggtttactaTGGCAGATGGTCAGTGTGGGAATAGGTTGACTACTGGCAGAtagtcagtgtgtgaataggtttactcctggcagatggtcagtgtgtgaataggtttactcctgacagatggtcagtgtgtgtgaataggttcactatggcagatggtcagtgtgtgtgaataggtttactGCTGGcagaaggtcagtgtgtgtgaataggtttactaTGGCA

Function

NR:

description
PREDICTED: tektin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036963625.1 False 576 mRNA 0.51 2 40871432 40872675
TU2322035 True 845 lncRNA 0.45 2 40872670 40873618

Neighbor

gene id symbol gene type direction distance location
LOC110519157 slc24a5 coding downstream 39140 40804103 ~ 40832292 (-)
LOC110506139 slc12a1 coding downstream 135206 40680421 ~ 40736226 (-)
dut dut coding downstream 203590 40663518 ~ 40667842 (-)
LOC110519217 LOC106587666 coding downstream 505485 40335544 ~ 40365947 (-)
LOC110506134 LOC106587633 coding downstream 563521 40296124 ~ 40307911 (-)
LOC110519559 LOC106562535 coding upstream 65355 40938030 ~ 40983650 (-)
LOC110506810 LOC106562534 coding upstream 558587 41431262 ~ 41439598 (-)
LOC110515873 LOC106562546 coding upstream 590041 41461857 ~ 41567947 (-)
LOC118944424 LOC106587313 coding upstream 787627 41660302 ~ 41665080 (-)
LOC118944452 LOC106587168 coding upstream 792522 41665197 ~ 41675473 (-)
G2030145 NA non-coding downstream 2187 40868972 ~ 40869245 (-)
G2030140 NA non-coding downstream 6913 40864239 ~ 40864519 (-)
G2030131 NA non-coding downstream 25741 40844750 ~ 40845691 (-)
G2030117 NA non-coding downstream 44167 40800908 ~ 40827265 (-)
G2029934 NA non-coding downstream 106820 40764369 ~ 40764612 (-)
G2030150 NA non-coding upstream 9234 40881909 ~ 40882197 (-)
G2030151 NA non-coding upstream 9761 40882436 ~ 40882688 (-)
G2030152 NA non-coding upstream 11058 40883733 ~ 40884072 (-)
G2030153 NA non-coding upstream 12056 40884731 ~ 40885082 (-)
G2030154 NA non-coding upstream 13960 40886635 ~ 40886953 (-)
G2030106 NA other downstream 92444 40775714 ~ 40778988 (-)
G2029858 fbn1 other downstream 303920 40551179 ~ 40567512 (-)
G2029844 NA other downstream 363150 40507746 ~ 40508282 (-)
LOC110506132 LOC106562499 other downstream 601657 40213044 ~ 40269852 (-)
pldn pldn other downstream 670617 40197134 ~ 40200916 (-)
G2030157 NA other upstream 14928 40887603 ~ 40888684 (-)
G2030162 NA other upstream 25795 40898470 ~ 40899021 (-)
G2030156 NA other upstream 33948 40906623 ~ 40907193 (-)
G2030291 NA other upstream 338802 41211477 ~ 41211852 (-)
G2030147 NA non-coding downstream 88 40872187 ~ 40872582 (-)

Expression


Co-expression Network