LOC110506810 (LOC106562534)


Basic Information

Item Value
gene id LOC110506810
gene name LOC106562534
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 41431262 ~ 41439598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964050.1
tGTTAGAGGAATGAGAGTTGTGAGACCCCAGCTGCAcgaacagaggtcaggggtctTTAATGTCATGACTGTGGAACACTCCTCTCACAACATGTGCTCATGCTATGAAACCGGACCACCATCTACCTACTCAAGGTCTTATGAGATGGCCGGATCTAAGATACAAGGTTACACAGAAATTGTTTAAAATCTCCCTTTTTGTTTTGACTTTTGCTTTACCCTGACCTGGCGTGTAACCAGGCACGGCTGACTATAAGAGAACCAGTGAGAGTTGATCAAGAACTCAGACCATCAGGAGAAGCCGGTAGCAGGGAGTCTGGGTTGTTGCTTCAGTTTCAGAGTGTGAGTGTATCGCGTCCGTCCGTTTGAGAGATTGACCATTTTAATCACCTCGGAAGCAACAGTGTTTCTTCAGTTCAGCAGCTGGtcgtggagtgtgtgtgtgtgcgtgtcattGCGTCAGTGTGTCtaccatgtgtgtgtgatggatcTGTTGTCGCCTGTGTGTGGACGTGTGATGGCGGTGGTGTGCTTGGACACCGTCATAGCCGACCTGTTGGTGTCCGAGTCACGGAACGCCACAGCCACCAGGTCAGAGGGCATCTCCCTGGCAACGGGgtccctcctcctgctcctctgtctGCTGCTGGCTGCCTGGCGTCACACAGACAACAACTCTGTCCCAGGTCCTTTTTTCTGTCTGGGTGTGGGTCCTCTCCTCTCATACCTCAGGTTTATATGGACAGGTATTGGCACTGCCAGTAACTATTACAACAGTAAATATGGAGACATCGTCAGGGTCTGGATCAACGGAGAGGAGACATTCATACTCAGCAGTTCCTCTGCAGTGCATCATGTTCTGAGACAGGGGCGTTACACCTCTCGGTTCGGCAGTAAACAGGGTCTGAGCTGTATTGGCATGGATGAGAGAGGCATCATCTTCAACAGCAACATAGCTCTATGGAAGAAGACCCGCACCTACTTCGCTAAAGCTCTGACAGGACCTGGGCTGCAGAAGACAGTAGACGTGTGTGTCTCGTCCACACAGACTCACCTGGACGCTCTCCAGGGGCCGGACGGACTGATGGGTGGACAGGTGGACGTCCTGAGTCTACTAAGGTGTACAGTAGTGGACATCTCTAACAGACTGTTCCTAGGGGTGCCTCTCAACGAGAAGGAGCTGCTGCAGAAGATTCAGAAGTACTTTGACACGTGGCAGACAGTGCTGATCAAACCAGATGTCTACTTCAAGTTGGACTGGATCCAGCAGAAACACAGGAGAGCAGCTCAGGAGCTGCAGGATGCTATAGAGAGTCTGGTCGACCAGAAGAGAAGAGGTCTACAGGAAGCTGACAAACTGGACCACATCAACTTCACTGCAGACCTCATCTTTGCACAGAGCCATGGGGAGCTGTCAGCTGAGAATGTGAGGCAGTGTGTATTGGAGATGGTGATAGCAGCTCCGGACACTCTGTCTATCAGTCTGTTCTTCATGCTGCTGCTTCTCAAACAGAACCCTGACGTAGAACTACAGCTCCTAGAAGAGATAGACACTGTTATAGGTGATAGGGAGCTCCACAACTCTGACCTGCAGAACCTAAGGGTCCTAGAGAGCTTCATCAATGAGTCCTTAAGGTTCCATCCTGTGGTGGACTTTACCATGCGCCGGGCACTGTCTGATGATGTCATCAGTGGCTACCGGGTGCCAAAGGGGACAAACATCATTCTGAACATGGGACGCATGCACAGATCAGAGTTCTTCCTCAAGCCCAATGAGTTCAGTCTGGACAACTTTGAGAAAAATATACCTAATCGTTTCTTCCAGCCTTTCGGATCCGGTCCTCGATCCTGCGTTGGCAAGCACATTGCCATGGTGATGATGAAATCCATCCTGGTTACGCTTTTGTCACGGTACTCTGTGTGTCCTCATGAGGGCCTGACCCTAGATCGCCTCCCACAGACCAACAACCTATCACAGCAGcccgtggaggaggagggggagcctCACACCATGAAGTTCCTCCCAAGACACCAAGCCAGGAAGCAGTCTTAGAGCAGGGCTCAGACACTGGTATAtcccaaatgacaacctattccctatgtagtgcaatacCTTTCACCAGGgctcacagggctctggtcaaaagtagtgcactatgtaggaaatggGGTGGTATttgggacaaagattgtattttAGGGCTAATCTTAAAATAATACTTACTTCCCACATATGTAATATGTCAGTATTTGATTcatatttgtatgtttttttaaTTTGTACTACAAGTTATTTTGTGACTTTTTCTATGATAATAAGTTATGTTCCAGGAGGACATGTCTTTGTAGCCAATGGTATCTGTAATAAGAAACGCTTGTTGTTGATTCACACACACCATTATAATTATAGAATCTGAACTGTACATTAACACTTTTAAAACTAAATGACGCTGAAGTGAAAATAAattgtatatattgttttatt

Function

NR:

description
PREDICTED: aromatase-like

GO: NA

KEGG:

id description
K07434 CYP19A; aromatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964050.1 True 2485 mRNA 0.48 10 41431262 41439598

Neighbor

gene id symbol gene type direction distance location
LOC110519559 LOC106562535 coding downstream 447612 40938030 ~ 40983650 (-)
LOC118944423 NA coding downstream 558587 40871432 ~ 40873618 (-)
LOC110519157 slc24a5 coding downstream 598970 40804103 ~ 40832292 (-)
LOC110506139 slc12a1 coding downstream 695036 40680421 ~ 40736226 (-)
dut dut coding downstream 763420 40663518 ~ 40667842 (-)
LOC110515873 LOC106562546 coding upstream 23118 41461857 ~ 41567947 (-)
LOC118944424 LOC106587313 coding upstream 220704 41660302 ~ 41665080 (-)
LOC118944452 LOC106587168 coding upstream 225599 41665197 ~ 41675473 (-)
LOC118944455 lysm2 coding upstream 283677 41723275 ~ 41738093 (-)
LOC110506143 LOC106562454 coding upstream 315423 41755021 ~ 41779868 (-)
G2030653 NA non-coding downstream 2248 41428743 ~ 41429014 (-)
G2030393 NA non-coding downstream 49605 41381301 ~ 41381657 (-)
G2030389 NA non-coding downstream 50180 41376234 ~ 41381082 (-)
G2030372 NA non-coding downstream 63260 41366503 ~ 41368002 (-)
G2030365 NA non-coding downstream 74479 41356089 ~ 41356783 (-)
G2030663 NA non-coding upstream 8119 41447717 ~ 41449569 (-)
G2030664 LOC106587315 non-coding upstream 10696 41450294 ~ 41451025 (-)
G2030633 NA non-coding upstream 20786 41460384 ~ 41461709 (-)
G2030671 NA non-coding upstream 32113 41471711 ~ 41472739 (-)
G2030678 NA non-coding upstream 63563 41503161 ~ 41544272 (-)
G2030291 NA other downstream 219410 41211477 ~ 41211852 (-)
G2030156 NA other downstream 524069 40906623 ~ 40907193 (-)
G2030162 NA other downstream 532241 40898470 ~ 40899021 (-)
G2030157 NA other downstream 542578 40887603 ~ 40888684 (-)
G2030106 NA other downstream 652274 40775714 ~ 40778988 (-)
LOC110506841 cart other upstream 707762 42147360 ~ 42148871 (-)
LOC118944568 LOC106562433 other upstream 776841 42214901 ~ 42217502 (-)
G2031225 NA other upstream 903684 42343282 ~ 42346725 (-)
G2031259 NA other upstream 928656 42368254 ~ 42369909 (-)

Expression


Co-expression Network