dut (dut)


Basic Information

Item Value
gene id dut
gene name dut
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40663518 ~ 40667842 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036963536.1
tgtagctGATGCCGCAGCCGGGGAGGACTGTATCTTTAACAAGATGGAGCACTTCGTTGCAAAGCAGAGGCTCTACTGGCGGTGTTGTTCTTCGATTATCGCTGCCCAGTCTTCAGTACTCTCACACAGAACATTTTATCTGTATTCTCCCACTCTGGCCAGGAGAAAAGGATGCGAGAATGCAGAAGTGATAGACGCCGCAGAAGTTTCTCCACTGAAGAGGACAAAGCCACATGCAGTGGCAGAGGATGTGATATCGGTGCTGAAGTTCTCCAAGTTGTCTGAACATGCCACTGCTCCTACCCGGGGCTCTGCTAAAGCTGCAGGCTACGACCTGTTCAGTGCCTATGACTACAGTATTGGTCCTATGGACAAGGCTATCGTGAAGACTGACATCCAGATAGCAGTTCCTTCAGGCTGCTATGGCAGAGTGGCACCACGGTCTGGCCTGGCTGCAAAACACTTCATCGATGTTGGGGCTGGAGTAGTGGATGAGGACTATAGAGGTAATGTGGGGGTGGTGCTGTTCAACTTCAGCAAGGAAACCTTTGACGTGAAAAAAGGGGACCGTGTGGCTCAGCTGGTGTGCGAGAGGATCTGCTACCCAGACCTACAGGAGCTAAAGACTCTGGATGAGACCGAGCGTGGGGCTGGAGGATTTGGCTCCACAGGCAGCAACTGATACATCAACGTTGTAAATAAACCAGCTTATTAGTTTAGTTCTGTTACATGTTATGAGGTTGTACAATAATTACATTAAAGATTGTTATTATCCCTTTG
>XM_036963537.1
CTAGCCACAAATTCTGACGAACTCAATCGTCATGAAACGAAAATACAGCGATGCGTTTCTCTAGCTTGGTTTAATACAAACTTTGATAAATAACGAGGAGCGCCCAAAATGTGTTTTGTGCAGGGAAGTGCTTAGTAATGTTCAAAACGAACAAATTAAAACGACAGGTCTTGACCAAACACCCACAGCACGACGGTAAAcccagaacagggcagaatgcgtcaggaaacagtgcttcgacAGTGGGAAAAAGTGATAGACGCCGCAGAAGTTTCTCCACTGAAGAGGACAAAGCCACATGCAGTGGCAGAGGATGTGATATCGGTGCTGAAGTTCTCCAAGTTGTCTGAACATGCCACTGCTCCTACCCGGGGCTCTGCTAAAGCTGCAGGCTACGACCTGTTCAGTGCCTATGACTACAGTATTGGTCCTATGGACAAGGCTATCGTGAAGACTGACATCCAGATAGCAGTTCCTTCAGGCTGCTATGGCAGAGTGGCACCACGGTCTGGCCTGGCTGCAAAACACTTCATCGATGTTGGGGCTGGAGTAGTGGATGAGGACTATAGAGGTAATGTGGGGGTGGTGCTGTTCAACTTCAGCAAGGAAACCTTTGACGTGAAAAAAGGGGACCGTGTGGCTCAGCTGGTGTGCGAGAGGATCTGCTACCCAGACCTACAGGAGCTAAAGACTCTGGATGAGACCGAGCGTGGGGCTGGAGGATTTGGCTCCACAGGCAGCAACTGATACATCAACGTTGTAAATAAACCAGCTTATTAGTTTAGTTCTGTTACATGTTATGAGGTTGTACAATAATTACATTAAAGATTGTTATTATCCCTTTG

Function

symbol description
dut Predicted to enable dUTP diphosphatase activity and magnesium ion binding activity. Predicted to be involved in dUMP biosynthetic process and dUTP catabolic process. Predicted to act upstream of or within nucleotide metabolic process. Is expressed in digestive system; nervous system; neural plate; pectoral fin; and tail bud. Orthologous to human DUT (deoxyuridine triphosphatase).

NR:

description
PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X2

GO: NA

KEGG:

id description
K01520 dut, DUT; dUTP pyrophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036963536.1 False 780 mRNA 0.49 7 40663518 40666752
XM_036963537.1 True 845 mRNA 0.47 7 40663518 40667842

Neighbor

gene id symbol gene type direction distance location
LOC110519217 LOC106587666 coding downstream 297571 40335544 ~ 40365947 (-)
LOC110506134 LOC106587633 coding downstream 355607 40296124 ~ 40307911 (-)
LOC110506132 LOC106562499 coding downstream 393666 40213044 ~ 40269852 (-)
pldn pldn coding downstream 462602 40197134 ~ 40200916 (-)
LOC110526651 LOC106562502 coding downstream 512742 40138871 ~ 40150776 (-)
LOC110506139 slc12a1 coding upstream 12579 40680421 ~ 40736226 (-)
LOC110519157 slc24a5 coding upstream 136261 40804103 ~ 40832292 (-)
LOC118944423 NA coding upstream 203590 40871432 ~ 40873618 (-)
LOC110519559 LOC106562535 coding upstream 270188 40938030 ~ 40983650 (-)
LOC110506810 LOC106562534 coding upstream 763420 41431262 ~ 41439598 (-)
G2029876 NA non-coding downstream 80906 40581285 ~ 40582612 (-)
G2029858 fbn1 non-coding downstream 96706 40551179 ~ 40567512 (-)
G2029857 NA non-coding downstream 114941 40548322 ~ 40548577 (-)
G2029856 NA non-coding downstream 121640 40541562 ~ 40541878 (-)
G2029854 NA non-coding downstream 123294 40539940 ~ 40540224 (-)
G2029907 NA non-coding upstream 3425 40671267 ~ 40671680 (-)
G2029908 NA non-coding upstream 4861 40672703 ~ 40673574 (-)
G2029918 NA non-coding upstream 41617 40709459 ~ 40709782 (-)
G2029919 NA non-coding upstream 43488 40711330 ~ 40714123 (-)
G2029934 NA non-coding upstream 96527 40764369 ~ 40764612 (-)
G2029844 NA other downstream 155236 40507746 ~ 40508282 (-)
G2028779 NA other downstream 1432708 39229129 ~ 39233948 (-)
G2030106 NA other upstream 107872 40775714 ~ 40778988 (-)
G2030157 NA other upstream 219761 40887603 ~ 40888684 (-)
G2030162 NA other upstream 230628 40898470 ~ 40899021 (-)
G2030156 NA other upstream 238781 40906623 ~ 40907193 (-)
G2030291 NA other upstream 543635 41211477 ~ 41211852 (-)

Expression


Co-expression Network