G2029856


Basic Information

Item Value
gene id G2029856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40541562 ~ 40541878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2321682
accatagatgaatgtgtctgcattctgtaccactctgctaggacgaccatagatgaatgtgtctgcattctgtaccaCTATGCTAGGACGACCATagatgaatgtgtctgcattctgtaccactctgctaggccgaccatagatgaatgtgtctgcattctgtaccactctgctaggacgaccatagatgaatgtgtctgcattctgtaccactctgctaggacgaccatagatgaatgtgtctgcattctgtaccactctgctaggacgaccatagatgaatgtgtctgcattctgtaccactctgctaggacgac

Function

NR:

description
PREDICTED: vegetative cell wall protein gp1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2321682 True 317 lncRNA 0.47 1 40541562 40541878

Neighbor

gene id symbol gene type direction distance location
LOC110519217 LOC106587666 coding downstream 175615 40335544 ~ 40365947 (-)
LOC110506134 LOC106587633 coding downstream 233651 40296124 ~ 40307911 (-)
LOC110506132 LOC106562499 coding downstream 271710 40213044 ~ 40269852 (-)
pldn pldn coding downstream 340646 40197134 ~ 40200916 (-)
LOC110526651 LOC106562502 coding downstream 390786 40138871 ~ 40150776 (-)
dut dut coding upstream 121640 40663518 ~ 40667842 (-)
LOC110506139 slc12a1 coding upstream 138543 40680421 ~ 40736226 (-)
LOC110519157 slc24a5 coding upstream 262225 40804103 ~ 40832292 (-)
LOC118944423 NA coding upstream 329554 40871432 ~ 40873618 (-)
LOC110519559 LOC106562535 coding upstream 396152 40938030 ~ 40983650 (-)
G2029854 NA non-coding downstream 1338 40539940 ~ 40540224 (-)
G2029850 LOC106587802 non-coding downstream 9366 40514800 ~ 40532196 (-)
G2029845 NA non-coding downstream 34204 40500752 ~ 40507358 (-)
G2029826 LOC106587774 non-coding downstream 78705 40458567 ~ 40462857 (-)
G2029815 NA non-coding downstream 113715 40424492 ~ 40427847 (-)
G2029857 NA non-coding upstream 6444 40548322 ~ 40548577 (-)
G2029858 fbn1 non-coding upstream 23856 40551179 ~ 40567512 (-)
G2029876 NA non-coding upstream 39407 40581285 ~ 40582612 (-)
G2029907 NA non-coding upstream 129389 40671267 ~ 40671680 (-)
G2029908 NA non-coding upstream 130825 40672703 ~ 40673574 (-)
G2029844 NA other downstream 33280 40507746 ~ 40508282 (-)
G2028779 NA other downstream 1310752 39229129 ~ 39233948 (-)
G2028777 LOC106587714 other downstream 1314503 39226363 ~ 39227059 (-)
G2030106 NA other upstream 233836 40775714 ~ 40778988 (-)
G2030157 NA other upstream 345725 40887603 ~ 40888684 (-)
G2030162 NA other upstream 356592 40898470 ~ 40899021 (-)
G2030156 NA other upstream 364745 40906623 ~ 40907193 (-)

Expression


Co-expression Network