G2029528


Basic Information

Item Value
gene id G2029528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 39966639 ~ 39968217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2321269
CCATGACTGAAACTTTTTATTTAGAAAAAGACATAAATAAGTCACGcactatagggaacagggtgcattTGCAATGCAGACCATGTCTAGTCAATTGGTCTGAGGCAGACATGCTTAATATCATCTCACACTGTAGCACCACTGTCTGTAAAGCCCTGAAAAACATTACATACCATCTCAGACACTGATAGAAACCTACACAGACAGACCAAGGATATTTAACTACAGGCCTGGAGGACCTGAACACTTCTGGTTTTCATCATCTCAGAGACGGGGCCAATCAATTAGCAGGTAGAAAAGAATCGGGCAGTAATGTGGACCTCCGGGCCTGGAGTAGAAGAACCCTGTTTTTATAAACTAGAAATGGATGTCTAACAtgacgagacagagagaaaaaggtaaactacaaaataacaatGAAATCTGCCAAGGGGCAATGCAAAGATGGCAActtaacatttttatttcatataaatataatatattaatGTATGTTTATTACACTAAAAAATAttcttgccacacacacacacacacattacttgaAGTAGAAAGGCAAGAGGGACATTCATAAAAACAAGTCAGGACACTAAGCAGTGGACAAAATGATGGGGTTTGTCCCCAAATGCCACCCCATTTCTATATAGGTCAGGGATATTGAAATCTGGACCAACAAGCCAGTTCCACTGTTGATTTTCATTCCTCCCCTCTTACCAGGAACGgctttagacctgagacaccagttGGGTGCcattaatgatcaggtagaacagataAGCAGGACTACGTCAGGCTTGGATTTGAATAGCCCTGAGATAGGGATGAAGTCCCCATTTGAGAAGCAGCCATCCACATCTAAATGGTCATCTGTGTAGCTGCACGGTCAAACAGAATGCAACCAACCATAGTAGTCCAGTTGTGGTCAACACAACATGTGGTCCCTGTGCTCTCGCTTTGACAAAATACTATATTTTAATAACATAACAGCGGAAAGATATGTAAACTAATAATATTCACATATTCCATCATTTCAGAAGGCCTTTAGTTTGTTGTGGTACAATCTCTAAGTATGACTGAATCATAGAGTTGGTAATAGTTGAAGGTATTACTGCAGACTGAAAGATGTGGAAACATTCAGTTGATGAATGAAACTAAACCATGTAATGGAATCCTGCTTCAGTGTGACACATGGGTGTAACTCACCAGGGGGTGAAGGGGGACATGTCCCATCCACTATTCAAAAAAAGATATTTTGGCCCTAAGTTagtctctcccccacccctcattTTCAAGACAGTGTTTTGCCCCTGTTGTGACACCATTTAACCCATTGAAGACCTACCACACGGCCATCACTTTGAAATGAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2321269 True 1367 lncRNA 0.41 2 39966639 39968217

Neighbor

gene id symbol gene type direction distance location
LOC118944392 NA coding downstream 157876 39807917 ~ 39808763 (-)
LOC110506772 LOC106562440 coding downstream 700427 39257054 ~ 39266212 (-)
LOC110506771 LOC106562441 coding downstream 712793 39243039 ~ 39253846 (-)
LOC118944513 NA coding downstream 724826 39236314 ~ 39241813 (-)
LOC110506770 NA coding downstream 742085 39182572 ~ 39224554 (-)
LOC110516672 NA coding upstream 71179 40039396 ~ 40043697 (-)
LOC110513022 LOC106587669 coding upstream 75876 40044093 ~ 40136691 (-)
LOC110526651 LOC106562502 coding upstream 170654 40138871 ~ 40150776 (-)
pldn pldn coding upstream 228917 40197134 ~ 40200916 (-)
LOC110506132 LOC106562499 coding upstream 245195 40213044 ~ 40269852 (-)
G2029525 NA non-coding downstream 28250 39934703 ~ 39938389 (-)
G2029515 NA non-coding downstream 59857 39900003 ~ 39906782 (-)
G2029516 NA non-coding downstream 69889 39896243 ~ 39896750 (-)
G2029486 NA non-coding downstream 129427 39836917 ~ 39837212 (-)
G2029485 NA non-coding downstream 130461 39835966 ~ 39836178 (-)
G2029542 NA non-coding upstream 5963 39974180 ~ 39974837 (-)
G2029543 NA non-coding upstream 7188 39975405 ~ 39975609 (-)
G2029544 NA non-coding upstream 8993 39977210 ~ 39977934 (-)
G2029555 NA non-coding upstream 105683 40073900 ~ 40074762 (-)
G2028779 NA other downstream 735829 39229129 ~ 39233948 (-)
G2028777 LOC106587714 other downstream 739580 39226363 ~ 39227059 (-)
LOC110506757 LOC106562446 other downstream 1462504 38411123 ~ 38504156 (-)
LOC110506753 LOC106587607 other downstream 1618283 38334242 ~ 38373760 (-)
G2027052 NA other downstream 2475223 37490852 ~ 37491416 (-)
G2029844 NA other upstream 539529 40507746 ~ 40508282 (-)
G2029858 fbn1 other upstream 582962 40551179 ~ 40567512 (-)
G2030106 NA other upstream 807497 40775714 ~ 40778988 (-)

Expression


Co-expression Network