Gene
RNA
| Item | Value |
|---|---|
| gene id | G2080793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 38630760 ~ 38631559 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2379276 | True | 459 | lncRNA | 0.44 | 2 | 38630760 | 38631559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508002 | LOC106581401 | coding | upstream | 2590 | 38619550 ~ 38628170 (+) |
| LOC110507217 | NA | coding | upstream | 156161 | 38469918 ~ 38474599 (+) |
| LOC110508017 | NA | coding | upstream | 570647 | 38052633 ~ 38060113 (+) |
| LOC110508012 | LOC106581399 | coding | upstream | 1061887 | 37536529 ~ 37568873 (+) |
| trnat-agu-152 | NA | coding | upstream | 1124958 | 37505729 ~ 37505802 (+) |
| LOC118944799 | NA | coding | downstream | 408014 | 39039573 ~ 39039625 (+) |
| LOC110508028 | neus | coding | downstream | 1036430 | 39667989 ~ 39681560 (+) |
| LOC110507222 | LOC106581437 | coding | downstream | 1063002 | 39694561 ~ 39701212 (+) |
| LOC110507223 | LOC106613251 | coding | downstream | 1149630 | 39781189 ~ 39938079 (+) |
| ssr3 | LOC106581450 | coding | downstream | 1663272 | 40294831 ~ 40297552 (+) |
| G2080782 | NA | non-coding | upstream | 12878 | 38617554 ~ 38617882 (+) |
| G2080781 | NA | non-coding | upstream | 13332 | 38616798 ~ 38617428 (+) |
| G2080780 | NA | non-coding | upstream | 17596 | 38612775 ~ 38613164 (+) |
| G2080777 | NA | non-coding | upstream | 23598 | 38606820 ~ 38607162 (+) |
| G2080763 | NA | non-coding | upstream | 34779 | 38595676 ~ 38595981 (+) |
| G2080824 | NA | non-coding | downstream | 44368 | 38675927 ~ 38677288 (+) |
| G2080885 | NA | non-coding | downstream | 174562 | 38806121 ~ 38806353 (+) |
| G2080987 | NA | non-coding | downstream | 184024 | 38815583 ~ 38818121 (+) |
| G2080988 | NA | non-coding | downstream | 185332 | 38816891 ~ 38817384 (+) |
| G2080999 | NA | non-coding | downstream | 192412 | 38823971 ~ 38824208 (+) |
| G2080014 | NA | other | upstream | 685609 | 37944932 ~ 37945151 (+) |
| G2079657 | NA | other | upstream | 811474 | 37815848 ~ 37819286 (+) |
| G2079468 | LOC106581367 | other | upstream | 1262624 | 37366739 ~ 37368136 (+) |
| G2079197 | NA | other | upstream | 1349928 | 37279105 ~ 37280832 (+) |
| LOC110536894 | NA | other | upstream | 1353903 | 37031161 ~ 37276857 (+) |
| G2081884 | LOC106581433 | other | downstream | 1196099 | 39827658 ~ 39837383 (+) |
| G2081949 | NA | other | downstream | 1300315 | 39931874 ~ 39933835 (+) |
| G2082162 | NA | other | downstream | 1325656 | 39957215 ~ 39957751 (+) |
| LOC110508042 | LOC106613262 | other | downstream | 2211955 | 40840706 ~ 40847141 (+) |
