G2080987


Basic Information

Item Value
gene id G2080987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38815583 ~ 38818121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379489
agtagtagtagtagtagtagtagtagtattactactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtagtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactatcagtagtggtagcagtagtagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagtagtagtagtattagtactagcagtagcagtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtgttagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagtggtagtagtagtagtagtagtagtagtattactactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtattactactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtagtagtagtagtagtattagtactagcagtagcagtagtagtagtagtagtagtagtagtagtagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagtagtagtagtagtagtagtagtagtactagcagtagtagtagtagtagtagtagtagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379489 True 883 lncRNA 0.40 4 38815583 38818121

Neighbor

gene id symbol gene type direction distance location
LOC110508002 LOC106581401 coding upstream 187413 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 340984 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 755470 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1246710 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 1309781 37505729 ~ 37505802 (+)
LOC118944799 NA coding downstream 221452 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 849868 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 876440 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 963068 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1476710 40294831 ~ 40297552 (+)
G2080885 NA non-coding upstream 9230 38806121 ~ 38806353 (+)
G2080824 NA non-coding upstream 138295 38675927 ~ 38677288 (+)
G2080793 NA non-coding upstream 184024 38630760 ~ 38631559 (+)
G2080782 NA non-coding upstream 197701 38617554 ~ 38617882 (+)
G2080781 NA non-coding upstream 198155 38616798 ~ 38617428 (+)
G2080999 NA non-coding downstream 5850 38823971 ~ 38824208 (+)
G2081033 NA non-coding downstream 47318 38865439 ~ 38865678 (+)
G2081057 NA non-coding downstream 68466 38886587 ~ 38886840 (+)
G2081063 NA non-coding downstream 73835 38891956 ~ 38892226 (+)
G2081064 NA non-coding downstream 74182 38892303 ~ 38892512 (+)
G2080014 NA other upstream 870432 37944932 ~ 37945151 (+)
G2079657 NA other upstream 996297 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1447447 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1534751 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1538726 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1009537 39827658 ~ 39837383 (+)
G2081949 NA other downstream 1113753 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1139094 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2025393 40840706 ~ 40847141 (+)

Expression


Co-expression Network