G2081057


Basic Information

Item Value
gene id G2081057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38886587 ~ 38886840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379564
CCAAGAAACACTTCCAAAAGGACTAATTCAAGGTACAAAGGAGTCGGAGAACTCAACAATAAAGGCAGAGATTGCTTTCTTATTGCTCACTTTAATCCATTGTACAGGATGTGGACAGGTGACGGACGTTTTTCCGTCAAGCTGACGTCTTCCTCAGAGTGACCTGACCATTGCACATAGTTCCTATTTATAGGCTAGTGGCTCATTGAGACACAACAGTGTATCAACATTATAATATGTTTCAAGGTCAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379564 True 254 lncRNA 0.41 1 38886587 38886840

Neighbor

gene id symbol gene type direction distance location
LOC110508002 LOC106581401 coding upstream 258417 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 411988 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 826474 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1317714 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 1380785 37505729 ~ 37505802 (+)
LOC118944799 NA coding downstream 152733 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 781149 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 807721 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 894349 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1407991 40294831 ~ 40297552 (+)
G2081033 NA non-coding upstream 20909 38865439 ~ 38865678 (+)
G2080999 NA non-coding upstream 62379 38823971 ~ 38824208 (+)
G2080987 NA non-coding upstream 68466 38815583 ~ 38818121 (+)
G2080988 NA non-coding upstream 69203 38816891 ~ 38817384 (+)
G2080885 NA non-coding upstream 80234 38806121 ~ 38806353 (+)
G2081063 NA non-coding downstream 5116 38891956 ~ 38892226 (+)
G2081064 NA non-coding downstream 5463 38892303 ~ 38892512 (+)
G2081074 NA non-coding downstream 12261 38899101 ~ 38899799 (+)
G2081076 NA non-coding downstream 13685 38900525 ~ 38900832 (+)
G2081105 NA non-coding downstream 50525 38937365 ~ 38938123 (+)
G2080014 NA other upstream 941436 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1067301 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1518451 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1605755 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1609730 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 940818 39827658 ~ 39837383 (+)
G2081949 NA other downstream 1045034 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1070375 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1956674 40840706 ~ 40847141 (+)

Expression


Co-expression Network