G2080988


Basic Information

Item Value
gene id G2080988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38816891 ~ 38817384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379492
agtactagcagtagtggtagcagtagcagcaacagtactagtattagtactagcagtagtggtagcagtagcagcaacagtagtagtaatagtactagcagtagtggtagcagtagcagcaacagtagtagtattagtactagcagtagcagtagcagtagcagcaacagtagtagtaatagtactagcagtagtggtagcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379492 True 203 lncRNA 0.43 2 38816891 38817384

Neighbor

gene id symbol gene type direction distance location
LOC110508002 LOC106581401 coding upstream 188721 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 342292 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 756778 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1248018 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 1311089 37505729 ~ 37505802 (+)
LOC118944799 NA coding downstream 222189 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 850605 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 877177 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 963805 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1477447 40294831 ~ 40297552 (+)
G2080885 NA non-coding upstream 10538 38806121 ~ 38806353 (+)
G2080824 NA non-coding upstream 139603 38675927 ~ 38677288 (+)
G2080793 NA non-coding upstream 185332 38630760 ~ 38631559 (+)
G2080782 NA non-coding upstream 199009 38617554 ~ 38617882 (+)
G2080781 NA non-coding upstream 199463 38616798 ~ 38617428 (+)
G2080999 NA non-coding downstream 6587 38823971 ~ 38824208 (+)
G2081033 NA non-coding downstream 48055 38865439 ~ 38865678 (+)
G2081057 NA non-coding downstream 69203 38886587 ~ 38886840 (+)
G2081063 NA non-coding downstream 74572 38891956 ~ 38892226 (+)
G2081064 NA non-coding downstream 74919 38892303 ~ 38892512 (+)
G2080014 NA other upstream 871740 37944932 ~ 37945151 (+)
G2079657 NA other upstream 997605 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1448755 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1536059 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1540034 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1010274 39827658 ~ 39837383 (+)
G2081949 NA other downstream 1114490 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1139831 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2026130 40840706 ~ 40847141 (+)

Expression


Co-expression Network