G2081728


Basic Information

Item Value
gene id G2081728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39558761 ~ 39559782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380312
tgatTCTGAAAAGGCAACCAGTAGTAAATGTGTCCATGTTCAATAGTAATGCAAAAAGTTGAATGTAGGAAATGAAAAAGGATCAGGAACAACTCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGACCAGTACTGACACTACACAGGTAAATGGCAGAAGTGATCAGTATTGACACTGCACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGAAGTGATCAGTATTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTATACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGTAGTGATCAGTACTGACACTACACAGGTAAATGGCAGAAGGGAAACAGTAGAAATATGGTTGTAATTCAATAGTGAACACGCCGGAATTGAGTAGGAAATAGGAAGTGCTCACAAGTAGTGAAACGTCCCAATTTATCACTAATTACTACATAAATCAATACTGGTTTACTACACATCTCAATAG

Function

NR:

description
PREDICTED: potassium channel subfamily T member 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380312 True 726 lncRNA 0.40 2 39558761 39559782

Neighbor

gene id symbol gene type direction distance location
LOC118944799 NA coding upstream 519136 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 930591 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1084162 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1498648 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1989888 37536529 ~ 37568873 (+)
LOC110508028 neus coding downstream 108207 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 134779 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 221407 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 735049 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 1101464 40661246 ~ 40670079 (+)
G2081724 NA non-coding upstream 5233 39553125 ~ 39553528 (+)
G2081720 NA non-coding upstream 7550 39550646 ~ 39551211 (+)
G2081711 NA non-coding upstream 15984 39542547 ~ 39542777 (+)
G2081709 NA non-coding upstream 16353 39542135 ~ 39542408 (+)
G2081706 NA non-coding upstream 17842 39540689 ~ 39540919 (+)
G2081738 NA non-coding downstream 12830 39572612 ~ 39573258 (+)
G2081766 NA non-coding downstream 66408 39626190 ~ 39626542 (+)
G2081767 NA non-coding downstream 66977 39626759 ~ 39626999 (+)
G2081771 NA non-coding downstream 78224 39638006 ~ 39638275 (+)
G2081772 NA non-coding downstream 78993 39638775 ~ 39639126 (+)
G2080014 NA other upstream 1613610 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1739475 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2190625 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2277929 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2281904 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 267876 39827658 ~ 39837383 (+)
G2081949 NA other downstream 372092 39931874 ~ 39933835 (+)
G2082162 NA other downstream 397433 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1283732 40840706 ~ 40847141 (+)

Expression


Co-expression Network