G2081738


Basic Information

Item Value
gene id G2081738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39572612 ~ 39573258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380322
CCACAAAGGGACCCTGCTCCGCATCATCCATTACTCACAGAACGTTAGCGTTTATCCCTTACATATCACACTGTTATAACTACTGTTCCTGGGTCTGTCGTTAACACTCTGTTATAACTACTGTTCCTGGGTTTGTCATTAACACTCTGTTATAACTACTGTTCCTGGGTCTGTCGTTAACACTCTGTTATAACTTTTGTTCCTGACTGACATAAagacagacataaagacagacagacataaagactgactgactgactgactgactgtctgactgactgactgactgactgaaataaagacagactgactgactgacataaagacagactgactgactgacataaagacagactgactgactgacgtaaagacagactgactgactgacataaagacagactgactgactgacataaagacagactgactgactgacataaagacagactgactgactgacataaagacagactgactgactgacataaagactgactgactgactgacataaagactgactgactgactgacaaagacagactgactgactgactgactgatat

Function

NR:

description
PREDICTED: uncharacterized protein LOC100136421 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380322 True 567 lncRNA 0.42 2 39572612 39573258

Neighbor

gene id symbol gene type direction distance location
LOC118944799 NA coding upstream 532987 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 944442 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1098013 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1512499 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 2003739 37536529 ~ 37568873 (+)
LOC110508028 neus coding downstream 94731 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 121303 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 207931 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 721573 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 1087988 40661246 ~ 40670079 (+)
G2081728 NA non-coding upstream 12830 39558761 ~ 39559782 (+)
G2081724 NA non-coding upstream 19084 39553125 ~ 39553528 (+)
G2081720 NA non-coding upstream 21401 39550646 ~ 39551211 (+)
G2081711 NA non-coding upstream 29835 39542547 ~ 39542777 (+)
G2081709 NA non-coding upstream 30204 39542135 ~ 39542408 (+)
G2081766 NA non-coding downstream 52932 39626190 ~ 39626542 (+)
G2081767 NA non-coding downstream 53501 39626759 ~ 39626999 (+)
G2081771 NA non-coding downstream 64748 39638006 ~ 39638275 (+)
G2081772 NA non-coding downstream 65517 39638775 ~ 39639126 (+)
G2081781 NA non-coding downstream 80227 39653485 ~ 39654504 (+)
G2080014 NA other upstream 1627461 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1753326 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2204476 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2291780 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2295755 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 254400 39827658 ~ 39837383 (+)
G2081949 NA other downstream 358616 39931874 ~ 39933835 (+)
G2082162 NA other downstream 383957 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1270256 40840706 ~ 40847141 (+)

Expression


Co-expression Network