G2081794


Basic Information

Item Value
gene id G2081794
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39686835 ~ 39687748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380390
gaatagtaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaatacaggactagtaaaggtatgttattacaggactagtaatacaggactagtaaaggcctgttaatacaggactagtaaaggtctgtaaatacaggactagtaaaggtctgttaatacaggactagtaatacaggactagtaatacaggactagtaaaggtctgtaaaTACAGGActtgtaaaggtctgttaatacaggactagtaaaggtctgtaaatacaggactagtaaaggtctattaatacaggactagtaatacaggactagtaaaggcctgttaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380390 True 435 lncRNA 0.36 2 39686835 39687748

Neighbor

gene id symbol gene type direction distance location
LOC110508028 neus coding upstream 5275 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 647210 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1058665 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1212236 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1626722 38052633 ~ 38060113 (+)
LOC110507222 LOC106581437 coding downstream 6813 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 93441 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 607083 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 973498 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 979269 40667017 ~ 40668632 (+)
G2081783 NA non-coding upstream 29692 39656847 ~ 39657143 (+)
G2081782 NA non-coding upstream 30458 39656178 ~ 39656377 (+)
G2081781 NA non-coding upstream 32331 39653485 ~ 39654504 (+)
G2081772 NA non-coding upstream 47709 39638775 ~ 39639126 (+)
G2081771 NA non-coding upstream 48560 39638006 ~ 39638275 (+)
G2081796 NA non-coding downstream 13722 39701470 ~ 39701755 (+)
G2081797 NA non-coding downstream 15711 39703459 ~ 39703984 (+)
G2081800 NA non-coding downstream 21693 39709441 ~ 39709756 (+)
G2081813 NA non-coding downstream 38170 39725918 ~ 39728025 (+)
G2081845 NA non-coding downstream 88414 39776162 ~ 39822521 (+)
G2080014 NA other upstream 1741684 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1867549 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2318699 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2406003 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2409978 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 139910 39827658 ~ 39837383 (+)
G2081949 NA other downstream 244126 39931874 ~ 39933835 (+)
G2082162 NA other downstream 269467 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1155766 40840706 ~ 40847141 (+)

Expression


Co-expression Network