G2081800


Basic Information

Item Value
gene id G2081800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39709441 ~ 39709756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380398
gatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaattaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgagaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaaattcagtctctgtATATGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380398 True 316 lncRNA 0.42 1 39709441 39709756

Neighbor

gene id symbol gene type direction distance location
LOC110507222 LOC106581437 coding upstream 8229 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 27881 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 669816 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1081271 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1234842 38469918 ~ 38474599 (+)
LOC110507223 LOC106613251 coding downstream 71433 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 585075 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 951490 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 957261 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 982647 40692403 ~ 40840064 (+)
G2081797 NA non-coding upstream 5457 39703459 ~ 39703984 (+)
G2081796 NA non-coding upstream 7686 39701470 ~ 39701755 (+)
G2081792 NA non-coding upstream 15935 39682685 ~ 39693506 (+)
G2081793 NA non-coding upstream 17489 39683582 ~ 39691952 (+)
G2081794 NA non-coding upstream 21693 39686835 ~ 39687748 (+)
G2081813 NA non-coding downstream 16162 39725918 ~ 39728025 (+)
G2081845 NA non-coding downstream 66406 39776162 ~ 39822521 (+)
G2081909 NA non-coding downstream 148704 39858460 ~ 39862653 (+)
G2081926 NA non-coding downstream 176970 39886726 ~ 39887553 (+)
G2081942 NA non-coding downstream 212069 39921825 ~ 39922050 (+)
G2080014 NA other upstream 1764290 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1890155 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2341305 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2428609 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2432584 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 117902 39827658 ~ 39837383 (+)
G2081949 NA other downstream 222118 39931874 ~ 39933835 (+)
G2082162 NA other downstream 247459 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1133758 40840706 ~ 40847141 (+)

Expression


Co-expression Network