G2081813


Basic Information

Item Value
gene id G2081813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39725918 ~ 39728025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380415
cctataatatcaacaacatttacaaaccctgtctccactcctcctataatatcaacatttacaatccctgtctccactcctcctttaatatcaacaacatttacaatccctgtctccactcctcctttaatatcaacatttacaatccctgtctccactcctcctttaatatcaacaacatttacaatccctgtctccactcctcctttaatatcaacaacatttacaatccctgtctccactcctcctttaatatcaacaacatttacaatccctgtctccactcctcctttaatatcaacatttacaatccctgtctccactcctcctttaatatcaacaacatttacaatccccgtctccactcctcctttaatatcaacaacatttacaatccctgtctccactcctcctttaATATCAACATTTACAATCCCCGTCTCCACTCCTCCTTTAATATCAACATTTACAA

Function

NR:

description
NLR family CARD domain-containing protein 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380415 True 472 lncRNA 0.38 2 39725918 39728025

Neighbor

gene id symbol gene type direction distance location
LOC110507222 LOC106581437 coding upstream 24706 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 44358 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 686293 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1097748 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1251319 38469918 ~ 38474599 (+)
LOC110507223 LOC106613251 coding downstream 53164 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 566806 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 933221 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 938992 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 964378 40692403 ~ 40840064 (+)
G2081800 NA non-coding upstream 16162 39709441 ~ 39709756 (+)
G2081797 NA non-coding upstream 21934 39703459 ~ 39703984 (+)
G2081796 NA non-coding upstream 24163 39701470 ~ 39701755 (+)
G2081792 NA non-coding upstream 32412 39682685 ~ 39693506 (+)
G2081845 NA non-coding downstream 48137 39776162 ~ 39822521 (+)
G2081909 NA non-coding downstream 130435 39858460 ~ 39862653 (+)
G2081926 NA non-coding downstream 158701 39886726 ~ 39887553 (+)
G2081942 NA non-coding downstream 193800 39921825 ~ 39922050 (+)
G2081943 NA non-coding downstream 195477 39923502 ~ 39923717 (+)
G2080014 NA other upstream 1780767 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1906632 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2357782 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2445086 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2449061 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 99633 39827658 ~ 39837383 (+)
G2081949 NA other downstream 203849 39931874 ~ 39933835 (+)
G2082162 NA other downstream 229190 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1115489 40840706 ~ 40847141 (+)

Expression


Co-expression Network