G2081943


Basic Information

Item Value
gene id G2081943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39923502 ~ 39923717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380572
gtctgtgagtataacagaactgaaatagcaggcgaaaccccgaggacaaaccatcccccccaaaaaatgttcatCCTACCACTGATTTCAATGGCTGGCACTTTTATAATAGGGTGAAATCGTGcctgattgcagttcctagggcttccactagatgtcaacagtctttagaaagagtttcatgctGGCTTTTGGAAATATGAGGGAGAATAATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380572 True 216 lncRNA 0.43 1 39923502 39923717

Neighbor

gene id symbol gene type direction distance location
LOC110507222 LOC106581437 coding upstream 222290 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 241942 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 883877 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1295332 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1448903 38469918 ~ 38474599 (+)
ssr3 LOC106581450 coding downstream 371114 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 737529 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 743300 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 768686 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 916989 40840706 ~ 40847141 (+)
G2081942 NA non-coding upstream 1452 39921825 ~ 39922050 (+)
G2081926 NA non-coding upstream 35949 39886726 ~ 39887553 (+)
G2081909 NA non-coding upstream 60849 39858460 ~ 39862653 (+)
G2081845 NA non-coding upstream 100981 39776162 ~ 39822521 (+)
G2081813 NA non-coding upstream 195477 39725918 ~ 39728025 (+)
LOC110507223 LOC106613251 non-coding downstream 13364 39781189 ~ 39938079 (+)
G2081950 NA non-coding downstream 16357 39940074 ~ 39940355 (+)
G2082145 NA non-coding downstream 21887 39945604 ~ 39945812 (+)
G2082147 NA non-coding downstream 22135 39945852 ~ 39946484 (+)
G2082163 NA non-coding downstream 35147 39958864 ~ 39959203 (+)
G2081884 LOC106581433 other upstream 86119 39827658 ~ 39837383 (+)
G2080014 NA other upstream 1978351 37944932 ~ 37945151 (+)
G2079657 NA other upstream 2104216 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2555366 37366739 ~ 37368136 (+)
G2081949 NA other downstream 8157 39931874 ~ 39933835 (+)
G2082162 NA other downstream 33498 39957215 ~ 39957751 (+)
G2083005 NA other downstream 1057653 40981370 ~ 40984854 (+)
G2083239 NA other downstream 1288487 41212204 ~ 41212772 (+)

Expression


Co-expression Network