G2082554


Basic Information

Item Value
gene id G2082554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40695608 ~ 40696534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381352
CTCCCTAAACACTGCCCAGtgtccactctctctttctaaacacTGCCCAGTGTCCACTCTCTCTTCCTAaacACTGCCCAGTGTCCACTCTCTCTTCCTAAACATTGCCCAGTGTCCACTCTCTCTTCCTAAACACTGCCCAGTGTCCACTCTCTGTTCCTAAACACTGCCCAGTGTCCACTCTCTCTTCCTAAACACTGCCCAGTGTCCACTCTCTCTTGCTAAACACTGCCCAGTGTCCACTCTCTCTTCCTAAACACTGCCCAGTGTCCACTCTCTCTTCCTAAACACTACCCAGTGTCCACTCTCTCTTCCTAAACACTACCCAGTGTCCACTCTCTCTTCCTAAACACTGCCAGTCGTCTCATAACAGGCCCTCTTTTCATCTCTCTGACCTCATTTgggatgtttaaaaaaatactaaCACAGAGATGAAGATCAATGTTCAGTGAAGAACTGAGACAGCTGGATTCTGACAGTATGACCTGGTTGTCTTTTGTTTAATAATTTGTGTGTTTCTGACTACAGAGACGACTTTCAGATGGGATAAGGCTTGAACTATTTTTGTTCAATTTTTCTACAGCAGTCTCAGAAATCCcagacactcttgacattctctcaaccagcttcatgaggtagtcacctggaatgcttttcaattaacaggtgtgctttgcaaagggtggctactttgaagaatcaaaaatagaaattgtttaacgctttttttggttactacatgattccatatgtgttatttcatagttttgatgtcttcaccattattctgcaatgtagaaaatagtaaaaataaagaaaaaccctttaatgagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381352 True 834 lncRNA 0.42 2 40695608 40696534

Neighbor

gene id symbol gene type direction distance location
LOC110508037 LOC106581457 coding upstream 25529 40661246 ~ 40670079 (+)
LOC118944712 NA coding upstream 26976 40667017 ~ 40668632 (+)
ssr3 LOC106581450 coding upstream 398056 40294831 ~ 40297552 (+)
LOC110507223 LOC106613251 coding upstream 757529 39781189 ~ 39938079 (+)
LOC110507222 LOC106581437 coding upstream 994396 39694561 ~ 39701212 (+)
LOC110508042 LOC106613262 coding downstream 144172 40840706 ~ 40847141 (+)
LOC110507226 LOC106581479 coding downstream 160596 40857130 ~ 40878102 (+)
LOC118944684 LOC106613262 coding downstream 207980 40904514 ~ 40907313 (+)
LOC110508044 LOC106581474 coding downstream 295544 40992078 ~ 40996568 (+)
LOC110507231 LOC106581468 coding downstream 466709 41163243 ~ 41168484 (+)
G2082509 NA non-coding upstream 23081 40671690 ~ 40672527 (+)
G2082525 NA non-coding upstream 55217 40636576 ~ 40640391 (+)
G2082517 NA non-coding upstream 71979 40622440 ~ 40623629 (+)
G2082518 NA non-coding upstream 75513 40619412 ~ 40620095 (+)
G2082516 NA non-coding upstream 77765 40617547 ~ 40617843 (+)
G2082604 NA non-coding downstream 108939 40805473 ~ 40805922 (+)
G2082609 NA non-coding downstream 115561 40812095 ~ 40812351 (+)
G2082888 NA non-coding downstream 146294 40842828 ~ 40843107 (+)
G2082897 NA non-coding downstream 155265 40851799 ~ 40931560 (+)
G2082162 NA other upstream 737857 39957215 ~ 39957751 (+)
G2081949 NA other upstream 761773 39931874 ~ 39933835 (+)
G2081884 LOC106581433 other upstream 858225 39827658 ~ 39837383 (+)
G2080014 NA other upstream 2750457 37944932 ~ 37945151 (+)
G2083005 NA other downstream 284836 40981370 ~ 40984854 (+)
G2083239 NA other downstream 515670 41212204 ~ 41212772 (+)
LOC110507232 LOC106593204 other downstream 809825 41485189 ~ 41507173 (+)
G2083851 NA other downstream 1274725 41971259 ~ 42112036 (+)

Expression


Co-expression Network