Gene
RNA
| Item | Value |
|---|---|
| gene id | G2082604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 40805473 ~ 40805922 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2381405 | False | 204 | lncRNA | 0.49 | 2 | 40805473 | 40805922 |
| TU2381406 | True | 221 | lncRNA | 0.49 | 2 | 40805620 | 40805922 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508037 | LOC106581457 | coding | upstream | 135394 | 40661246 ~ 40670079 (+) |
| LOC118944712 | NA | coding | upstream | 136841 | 40667017 ~ 40668632 (+) |
| ssr3 | LOC106581450 | coding | upstream | 507921 | 40294831 ~ 40297552 (+) |
| LOC110507223 | LOC106613251 | coding | upstream | 867394 | 39781189 ~ 39938079 (+) |
| LOC110507222 | LOC106581437 | coding | upstream | 1104261 | 39694561 ~ 39701212 (+) |
| LOC110508042 | LOC106613262 | coding | downstream | 34784 | 40840706 ~ 40847141 (+) |
| LOC110507226 | LOC106581479 | coding | downstream | 51208 | 40857130 ~ 40878102 (+) |
| LOC118944684 | LOC106613262 | coding | downstream | 98592 | 40904514 ~ 40907313 (+) |
| LOC110508044 | LOC106581474 | coding | downstream | 186156 | 40992078 ~ 40996568 (+) |
| LOC110507231 | LOC106581468 | coding | downstream | 357321 | 41163243 ~ 41168484 (+) |
| G2082554 | NA | non-coding | upstream | 108939 | 40695608 ~ 40696534 (+) |
| G2082509 | NA | non-coding | upstream | 132946 | 40671690 ~ 40672527 (+) |
| G2082525 | NA | non-coding | upstream | 165082 | 40636576 ~ 40640391 (+) |
| G2082517 | NA | non-coding | upstream | 181844 | 40622440 ~ 40623629 (+) |
| G2082518 | NA | non-coding | upstream | 185378 | 40619412 ~ 40620095 (+) |
| G2082609 | NA | non-coding | downstream | 6173 | 40812095 ~ 40812351 (+) |
| G2082888 | NA | non-coding | downstream | 36906 | 40842828 ~ 40843107 (+) |
| G2082897 | NA | non-coding | downstream | 45877 | 40851799 ~ 40931560 (+) |
| G2082162 | NA | other | upstream | 847722 | 39957215 ~ 39957751 (+) |
| G2081949 | NA | other | upstream | 871638 | 39931874 ~ 39933835 (+) |
| G2081884 | LOC106581433 | other | upstream | 968090 | 39827658 ~ 39837383 (+) |
| G2080014 | NA | other | upstream | 2860322 | 37944932 ~ 37945151 (+) |
| G2083005 | NA | other | downstream | 175448 | 40981370 ~ 40984854 (+) |
| G2083239 | NA | other | downstream | 406282 | 41212204 ~ 41212772 (+) |
| LOC110507232 | LOC106593204 | other | downstream | 700437 | 41485189 ~ 41507173 (+) |
| G2083851 | NA | other | downstream | 1165337 | 41971259 ~ 42112036 (+) |
