LOC110508501 (LOC106600384)


Basic Information

Item Value
gene id LOC110508501
gene name LOC106600384
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10535026 ~ 10540345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589058.2
tgtgtatatcgGGTTGTTAATATAGTGATTATTCAGATACTGACCTATTGATGGACGCACAGATCCAGACTTCTAGAATTTGGCAACACACTTGTAGCCTACAGAAAACGTACAATCAATTCATCTTAGAAACTAGCCTACTTAGTCGAGTGCAATTTTGCGTGGAGGAGGGGTGGGATGGCGCGCAGTAGAAAGATGATGGCGACATTTGATACCTAATTTGGTTTGCACTGGGCGGGGAGCTGGGTGGATGTGCTTTTCTTACTATGACTAGGGAGAACGGACTAGGAGGGCTACGCTTGCAAACTCCCATTCGATTGGAGATCCTGAGAGAAACTGAGGATATTGCAGCCACAACGTAACAAAGAAGATCCCTCTGCACCCGATGCACCAAGAACAGTAGTCCTACAGTATTCCACATAAATATCTCCTCTCCGGCCTATTCAGCCTTTCACTTTATTCTAACCCATTCTAGTTGTCAAGCATCATCCATATCCCATCATGCCGATAGTAGTGGTGCACTCCAACCCCCTGTTCTGGGTGCGTTTGTGTGCTCTGGTCTTCTCCTGTGTGGCCTTTGCTGTGACCGTCCATGGGGCCAACCTCTCCCATGGCACAGgggactggtgtgtgttctgctggGCCTTCAGCTTCGCTGGGAccctgctggtgctgctggtggaGCTGTTTGGCCTGCAGACCCGTGCCCCTGTCTCCTGGAAGAACTTCCCCATCACCTTTGCCTGCTACGCCTCcctgctctgcctctctgcctccatcATCTTCCCCCTCTACTTCCTCAAGGGTCAGACCTACCGCAGCGAGACTCAAAACTACCGCATTGTGGCCACCGTCTTTTCCTGCCTGGCAACCATCGCTTACATTTGTGAGGTGAGCATCAGCAAAGCCAGGCCAGGAGAGGTAGCAGGTTACATGGCCACCGCCCCGGGTCTGCTCAAGGTGTGTGAGACTTTTGTAGCCTGCGTCATCTTCGTCTTCATCAGCGACCCAGTGTCCTACGACTCACACGATGCACTGAGGTGGTGCCTGGCCGTCTTCTGCATCTGTTTCATCCTGTCGGCGGCCATTATAGTGCTGTGTATCTGTGAGTGCACCGGCTGCCTGCCCTTCCCCTTTGCCCGCTTCCTGTCCGCCTACGCCGTTCTGGCTGTCGCCATGTACCTCTCCGCCACCATCATCTGGCCCATTTTTAAGTTTGACAAGAAGCACGGGGGATCCTCCAGGCCCTATGGCTGTGGCAGATATGCAGGGCTGTGCGACTGGGACAGGCAGATGGCTGTGGCTGTGCTCACCGCAGTCAACCTTGTGCTCTACCTGGCAGACCTGATCTACTCTGCCCGACTGGTGTTTGTTACTGTGtaagaggaaggaagagggaggtagttgatttgattacaatgtagagagaggttgaggagtAGAAATGAAGAGGTAACGAAATAAACTGCTTACTGTATTTTGCGTCATTTATATATCAATGTTCAGACAGAGGTCACCTACTCACCCAGAGAGGGACTATACATTGAGGGGATTGCTGTGGTATTTCATGCAAAGGAAAACATCCTTATACAATGATGGTGTTATGGACCCAAGAACTCAGATTAGATGGACCagatcttttttttaaatttttttagtTTTATCTCTGAttatctgacacacaaacacacacagtgttcCATAGACAGGATGGATTTATTGAGTATGTTgatgttactatagttacatcTTAACTTTGAATGGTCTTTTTATAAGCATGGCTTTTTAGAAATGATGCAATACTGTTAGTAGATGTAATATTTAGTTTACAGAACAACTCACACCTACCTAGTTTGGAGTTAAGAAAACAAGAAAAGATGTAGAAAATGTGTACACTGCTCCAAAGTTTGAAAAAAATGAAAGTTTAGGAATTCATATTAAGTTGTGTTAGCCTAGCTTTTTGGTGATTTTATATTCctgttttcactttttttttttttttatatatatatatttttcatattCTGCCAAGCTGTTTGGTCAAGAGTTTATTTTATGTTGAAAGAATATATTCAAAAGTTAATGCGCATTTACTGTTTGACACTTGTTTGCTATAACTCATTTCCTGTCGGTGATGAGctctaaaaaaaaacatcttagaATAAAAAAAGTAAGTTGTTAGTTACATTTATTATCCTTAATCTGGCCCATTGGTTTGTACTACTGTGTCAGTCTGCTCTCGTGGACGAGAATGTCCACTTTGTCATAGAGAGGGAGATCTTTTCGCGGCATTGTCTTCGGCTCTACTTCCTGCTGTTACTGATACATGACATGTCCTTTGtttcgtttttttatttttattccacTGTGCCTGTTGAGAATGTGCCTACCACATCAGTGTTTTGGGAGAATATAATCCAGTGTTCAATAAAAGTCATGTGATATATTATTAAA

Function

NR:

description
myeloid-associated differentiation marker homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589058.2 True 2454 mRNA 0.45 2 10535026 10540345

Neighbor

gene id symbol gene type direction distance location
LOC110508159 LOC106600382 coding downstream 26677 10504714 ~ 10508349 (-)
LOC110508497 LOC106600370 coding downstream 71196 10418527 ~ 10463830 (-)
LOC110508496 LOC106600349 coding downstream 120386 10387353 ~ 10414640 (-)
LOC110508492 LOC106600326 coding downstream 211942 10306711 ~ 10323084 (-)
LOC110508491 LOC106600322 coding downstream 228406 10301488 ~ 10306620 (-)
LOC110508509 LOC106600390 coding upstream 137457 10677802 ~ 10681747 (-)
LOC110508508 LOC106600390 coding upstream 148838 10689183 ~ 10692245 (-)
LOC110508519 LOC106600402 coding upstream 304870 10845215 ~ 10852874 (-)
LOC110508520 LOC106600403 coding upstream 328771 10869116 ~ 10884590 (-)
LOC110508522 NA coding upstream 346282 10886198 ~ 10894141 (-)
G2103794 LOC107591355 non-coding downstream 13518 10521267 ~ 10521508 (-)
G2103792 NA non-coding downstream 15205 10519534 ~ 10519821 (-)
G2103791 NA non-coding downstream 15557 10519219 ~ 10519469 (-)
G2103756 NA non-coding downstream 16317 10462579 ~ 10518709 (-)
G2103772 NA non-coding downstream 48062 10482959 ~ 10486964 (-)
G2103807 NA non-coding upstream 2078 10542423 ~ 10542859 (-)
G2103808 NA non-coding upstream 3309 10543654 ~ 10552260 (-)
G2103844 NA non-coding upstream 61120 10601465 ~ 10602403 (-)
G2103853 NA non-coding upstream 79634 10619979 ~ 10620233 (-)
G2103857 NA non-coding upstream 83206 10623551 ~ 10623771 (-)
G2103257 NA other downstream 328350 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 419629 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 527123 10004226 ~ 10007929 (-)
LOC110508473 LOC106600236 other downstream 723168 9739138 ~ 9883971 (-)
G2103015 NA other downstream 758118 9776619 ~ 9776908 (-)
G2103920 NA other upstream 167667 10708012 ~ 10708499 (-)
G2105419 LOC104953893 other upstream 958781 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 4999423 15539768 ~ 15554897 (-)
G2109705 NA other upstream 5063340 15603685 ~ 15604463 (-)

Expression


Co-expression Network